RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LRRC47Q8N1G4 583 aaKnown RBP26.37■■□□□ 1.81
C9orf3-209ENST00000460573 ENAHQ8N8S7 591 aaPredicted RBP26.37■■□□□ 1.81
C9orf3-209ENST00000460573 ASCC2Q9H1I8 757 aaPredicted RBP26.37■■□□□ 1.81
C9orf3-209ENST00000460573 IFIT3O14879 490 aaKnown RBP26.36■■□□□ 1.81
C9orf3-209ENST00000460573 NDUFB10O96000 172 aa26.36■■□□□ 1.81
C9orf3-209ENST00000460573 SLFN13Q68D06 897 aa26.36■■□□□ 1.81
C9orf3-209ENST00000460573 GTF3C2Q8WUA4 911 aaPredicted RBP26.36■■□□□ 1.81
C9orf3-209ENST00000460573 TMEM87BQ96K49 555 aa26.36■■□□□ 1.81
C9orf3-209ENST00000460573 KAT14Q9H8E8 782 aa26.36■■□□□ 1.81
C9orf3-209ENST00000460573 WDR19Q8NEZ3 1342 aa26.36■■□□□ 1.81
C9orf3-209ENST00000460573 PRC1O43663 620 aa26.35■■□□□ 1.81
C9orf3-209ENST00000460573 ANTXR2P58335 489 aa26.35■■□□□ 1.81
C9orf3-209ENST00000460573 LACTBP83111 547 aaPredicted RBP26.35■■□□□ 1.81
C9orf3-209ENST00000460573 SEC23AQ15436 765 aa26.35■■□□□ 1.81
C9orf3-209ENST00000460573 ADCK5Q3MIX3 580 aa26.35■■□□□ 1.81
C9orf3-209ENST00000460573 IFIT1BQ5T764 474 aaKnown RBP26.35■■□□□ 1.81
C9orf3-209ENST00000460573 SMCR8Q8TEV9 937 aaPredicted RBP26.35■■□□□ 1.81
C9orf3-209ENST00000460573 GMCL1Q96IK5 515 aa26.35■■□□□ 1.81
C9orf3-209ENST00000460573 TMEM106CQ9BVX2 250 aa26.35■■□□□ 1.81
C9orf3-209ENST00000460573 SEC24BO95487 1268 aa26.34■■□□□ 1.81
C9orf3-209ENST00000460573 CYP2C8P10632 490 aa26.34■■□□□ 1.81
C9orf3-209ENST00000460573 COG2Q14746 738 aa26.34■■□□□ 1.81
C9orf3-209ENST00000460573 DHX32Q7L7V1 743 aaKnown RBP26.34■■□□□ 1.81
C9orf3-209ENST00000460573 TMTC2Q8N394 836 aa26.34■■□□□ 1.81
C9orf3-209ENST00000460573 TANGO6Q9C0B7 1094 aa26.34■■□□□ 1.81
C9orf3-209ENST00000460573 HOXC10Q9NYD6 342 aa26.34■■□□□ 1.81
C9orf3-209ENST00000460573 FMNL1O95466 1100 aaPredicted RBP26.33■■□□□ 1.81
C9orf3-209ENST00000460573 GNRH1P01148 92 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 HOXD10P28358 340 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 SLC1A4P43007 532 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 GCLCP48506 637 aaPredicted RBP26.33■■□□□ 1.81
C9orf3-209ENST00000460573 ANAPC15P60006 121 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 WTAPQ15007 396 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 TMEM67Q5HYA8 995 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 IGDCC4Q8TDY8 1250 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 DCAF4Q8WV16 495 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 PTCH2Q9Y6C5 1203 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 MYPNQ86TC9 1320 aa26.33■■□□□ 1.81
C9orf3-209ENST00000460573 BMP3P12645 472 aa26.32■■□□□ 1.8
C9orf3-209ENST00000460573 FAM83BQ5T0W9 1011 aa26.32■■□□□ 1.8
C9orf3-209ENST00000460573 CHST3Q7LGC8 479 aa26.32■■□□□ 1.8
C9orf3-209ENST00000460573 PNMA1Q8ND90 353 aa26.32■■□□□ 1.8
C9orf3-209ENST00000460573 JAKMIP1Q96N16 626 aaKnown RBP26.32■■□□□ 1.8
C9orf3-209ENST00000460573 P2RX7Q99572 595 aaKnown RBP26.32■■□□□ 1.8
C9orf3-209ENST00000460573 ADGRA2Q96PE1 1338 aa26.32■■□□□ 1.8
C9orf3-209ENST00000460573 PSMC4P43686 418 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 HERVK_113P62684 666 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 EXOSC10Q01780 885 aaKnown RBP26.31■■□□□ 1.8
C9orf3-209ENST00000460573 BLOC1S2Q6QNY1 142 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 C17orf99Q6UX52 265 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 LBX2Q6XYB7 198 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 TM6SF1Q9BZW5 370 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 ARHGAP39Q9C0H5 1083 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 FEM1BQ9UK73 627 aa26.31■■□□□ 1.8
C9orf3-209ENST00000460573 ZSWIM8A7E2V4 1837 aa26.3■■□□□ 1.8
C9orf3-209ENST00000460573 FLOT1O75955 427 aa26.3■■□□□ 1.8
C9orf3-209ENST00000460573 LIFRP42702 1097 aa26.3■■□□□ 1.8
C9orf3-209ENST00000460573 PRMT2P55345 433 aa26.3■■□□□ 1.8
C9orf3-209ENST00000460573 PLA2G6O60733 806 aa26.29■■□□□ 1.8
C9orf3-209ENST00000460573 MYCP01106 439 aaPredicted RBP26.29■■□□□ 1.8
C9orf3-209ENST00000460573 SNHG28P0DPA3 235 aa26.29■■□□□ 1.8
C9orf3-209ENST00000460573 DSG3P32926 999 aa26.29■■□□□ 1.8
C9orf3-209ENST00000460573 RAET1EQ8TD07 263 aa26.29■■□□□ 1.8
C9orf3-209ENST00000460573 CHURC1Q8WUH1 139 aa26.29■■□□□ 1.8
C9orf3-209ENST00000460573 ARMC5Q96C12 935 aa26.29■■□□□ 1.8
C9orf3-209ENST00000460573 IL17RAQ96F46 866 aa26.29■■□□□ 1.8
C9orf3-209ENST00000460573 NUP88Q99567 741 aaPredicted RBP26.29■■□□□ 1.8
C9orf3-209ENST00000460573 SH2B2O14492 632 aaPredicted RBP26.28■■□□□ 1.8
C9orf3-209ENST00000460573 PDHBP11177 359 aa26.28■■□□□ 1.8
C9orf3-209ENST00000460573 FAM160B2Q86V87 743 aa26.28■■□□□ 1.8
C9orf3-209ENST00000460573 MB21D1Q8N884 522 aa26.28■■□□□ 1.8
C9orf3-209ENST00000460573 PRPF38AQ8NAV1 312 aaKnown RBP26.28■■□□□ 1.8
C9orf3-209ENST00000460573 UPF2Q9HAU5 1272 aaKnown RBP26.28■■□□□ 1.8
C9orf3-209ENST00000460573 LY9Q9HBG7 655 aa26.28■■□□□ 1.8
C9orf3-209ENST00000460573 SPDYE16A6NNV3 312 aaPredicted RBP26.27■■□□□ 1.8
C9orf3-209ENST00000460573 BCRP11274 1271 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 CASTP20810 708 aaKnown RBP26.27■■□□□ 1.8
C9orf3-209ENST00000460573 FCGRTP55899 365 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 CAP1Q01518 475 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 FAM110CQ1W6H9 321 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 GPATCH4Q5T3I0 446 aaKnown RBP26.27■■□□□ 1.8
C9orf3-209ENST00000460573 SLF1Q9BQI6 1058 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 ZSWIM6Q9HCJ5 1215 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 PPP1R9AQ9ULJ8 1098 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 MTMR7Q9Y216 660 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 RABGAP1Q9Y3P9 1069 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 PDE4DIPQ5VU43 2346 aa26.27■■□□□ 1.8
C9orf3-209ENST00000460573 CCDC69A6NI79 296 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 TMEM232C9JQI7 657 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 RPS6KB1P23443 525 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 STAT2P52630 851 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 COL9A3Q14050 684 aaPredicted RBP26.26■■□□□ 1.79
C9orf3-209ENST00000460573 CCDC96Q2M329 555 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 RUFY3Q7L099 469 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 CATIPQ7Z7H3 387 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 FBXL16Q8N461 479 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 MORF4L1Q9UBU8 362 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 ISY1Q9ULR0 285 aaKnown RBP26.26■■□□□ 1.79
C9orf3-209ENST00000460573 ADAMTS5Q9UNA0 930 aa26.26■■□□□ 1.79
C9orf3-209ENST00000460573 CYP46A1Q9Y6A2 500 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms