RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 SCRN1Q12765 414 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 SNAPC2Q13487 334 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 GPATCH4Q5T3I0 446 aaKnown RBP12.46□□□□□ -0.41
CDHR4-203ENST00000460430 RGMBQ6NW40 437 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 GMCL1Q96IK5 515 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 MAP3K14Q99558 947 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 NCOA5Q9HCD5 579 aaKnown RBP12.46□□□□□ -0.41
CDHR4-203ENST00000460430 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
CDHR4-203ENST00000460430 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
CDHR4-203ENST00000460430 CXCL11O14625 94 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 GOLGA8HP0CJ92 632 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 ZBTB48P10074 688 aaPredicted RBP12.45□□□□□ -0.42
CDHR4-203ENST00000460430 BMP3P12645 472 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 VCAM1P19320 739 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 GNAQP50148 359 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 DGKZQ13574 1117 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 FAM83BQ5T0W9 1011 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
CDHR4-203ENST00000460430 RASAL3Q86YV0 1011 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
CDHR4-203ENST00000460430 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 KCNH4Q9UQ05 1017 aa12.45□□□□□ -0.42
CDHR4-203ENST00000460430 SNHG28P0DPA3 235 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 GJA5P36382 358 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 GTF2A2P52657 109 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 GRM1Q13255 1194 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 SPRYD7Q5W111 196 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
CDHR4-203ENST00000460430 TMTC3Q6ZXV5 915 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 FASTKD5Q7L8L6 764 aaKnown RBP12.44□□□□□ -0.42
CDHR4-203ENST00000460430 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 C12orf42Q96LP6 360 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 LZTS2Q9BRK4 669 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
CDHR4-203ENST00000460430 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 MAD2L2Q9UI95 211 aa12.44□□□□□ -0.42
CDHR4-203ENST00000460430 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.44□□□□□ -0.42
CDHR4-203ENST00000460430 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 PLEKHA8P1O95397 391 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 SLC10A3P09131 477 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 CETPP11597 493 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 CDC27P30260 824 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
CDHR4-203ENST00000460430 STAT2P52630 851 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 AKAP17AQ02040 695 aaKnown RBP12.43□□□□□ -0.42
CDHR4-203ENST00000460430 SH3D19Q5HYK7 790 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 KIAA1755Q5JYT7 1200 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 TRIM22Q8IYM9 498 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 STAG2Q8N3U4 1231 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 CCDC82Q8N4S0 544 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
CDHR4-203ENST00000460430 CCDC102AQ96A19 550 aa12.43□□□□□ -0.42
CDHR4-203ENST00000460430 CCL15-CCL14A0A0B4J2E2 113 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 PTPDC1A2A3K4 754 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 PALM3A6NDB9 673 aaPredicted RBP12.42□□□□□ -0.42
CDHR4-203ENST00000460430 FLOT1O75955 427 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 ST3GAL1Q11201 340 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDHR4-203ENST00000460430 CCL15Q16663 113 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 FAM160B2Q86V87 743 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 CMTR1Q8N1G2 835 aaKnown RBP12.42□□□□□ -0.42
CDHR4-203ENST00000460430 CHURC1Q8WUH1 139 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
CDHR4-203ENST00000460430 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 SEC63Q9UGP8 760 aaKnown RBP12.42□□□□□ -0.42
CDHR4-203ENST00000460430 FEM1BQ9UK73 627 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 SMC3Q9UQE7 1217 aa12.42□□□□□ -0.42
CDHR4-203ENST00000460430 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 PTPRFP10586 1907 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 MANSC4A6NHS7 340 aaPredicted RBP12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 PPFIA3O75145 1194 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 SLC16A2P36021 539 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 IRX3P78415 501 aaPredicted RBP12.41□□□□□ -0.42
CDHR4-203ENST00000460430 HMGN5P82970 282 aaKnown RBP12.41□□□□□ -0.42
CDHR4-203ENST00000460430 SSRP1Q08945 709 aaKnown RBP12.41□□□□□ -0.42
CDHR4-203ENST00000460430 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 CUL4AQ13619 759 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 SYDE2Q5VT97 1194 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 TTBK2Q6IQ55 1244 aa12.41□□□□□ -0.42
CDHR4-203ENST00000460430 HOMER1Q86YM7 354 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms