RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FBXO2Q9UK22 296 aaPredicted RBP17.4■□□□□ 0.38
LMNB1-203ENST00000460265 JRKLQ9Y4A0 524 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.37
LMNB1-203ENST00000460265 OAS2P29728 719 aaKnown RBP17.39■□□□□ 0.37
LMNB1-203ENST00000460265 PLCD1P51178 756 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 GRAPQ13588 217 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 PPP2R5BQ15173 497 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 GRIK5Q16478 980 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
LMNB1-203ENST00000460265 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 FRMPD2Q68DX3 1309 aaPredicted RBP17.39■□□□□ 0.37
LMNB1-203ENST00000460265 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 H2AFXP16104 143 aaPredicted RBP17.39■□□□□ 0.37
LMNB1-203ENST00000460265 GNG11P61952 73 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 SEC23AQ15436 765 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 TSR1Q2NL82 804 aaKnown RBP17.39■□□□□ 0.37
LMNB1-203ENST00000460265 DTHD1Q6ZMT9 781 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
LMNB1-203ENST00000460265 XDHP47989 1333 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 STK36Q9NRP7 1315 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 TCP10Q12799 353 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 VPS72Q15906 364 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 TTC31Q49AM3 519 aaPredicted RBP17.38■□□□□ 0.37
LMNB1-203ENST00000460265 MLKLQ8NB16 471 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 GOLGB1Q14789 3259 aaKnown RBP17.38■□□□□ 0.37
LMNB1-203ENST00000460265 SEC31AO94979 1220 aaKnown RBP17.38■□□□□ 0.37
LMNB1-203ENST00000460265 CALML3P27482 149 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 RASGRP2Q7LDG7 609 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 NCAPGQ9BPX3 1015 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 DESI2Q9BSY9 194 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 ZHX3Q9H4I2 956 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
LMNB1-203ENST00000460265 SEMA3EO15041 775 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 LEKR1Q6ZMV7 388 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 NYAP1Q6ZVC0 841 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 GPIHBP1Q8IV16 184 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 LRRC47Q8N1G4 583 aaKnown RBP17.38■□□□□ 0.37
LMNB1-203ENST00000460265 ZNF384Q8TF68 577 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 LZTFL1Q9NQ48 299 aa17.38■□□□□ 0.37
LMNB1-203ENST00000460265 GPSM2P81274 684 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
LMNB1-203ENST00000460265 NUP88Q99567 741 aaPredicted RBP17.37■□□□□ 0.37
LMNB1-203ENST00000460265 IDEP14735 1019 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 ARMCX5Q6P1M9 558 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 CCNT1O60563 726 aaKnown RBP17.37■□□□□ 0.37
LMNB1-203ENST00000460265 DDAH1O94760 285 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 PARP1P09874 1014 aaKnown RBP17.37■□□□□ 0.37
LMNB1-203ENST00000460265 CDC25BP30305 580 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 FMR1Q06787 632 aaKnown RBP eCLIP17.37■□□□□ 0.377e-6■■□□□ 12.8
LMNB1-203ENST00000460265 CCDC178Q5BJE1 867 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 QTRT2Q9H974 415 aaKnown RBP17.37■□□□□ 0.37
LMNB1-203ENST00000460265 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 TCP11L1Q9NUJ3 509 aa17.37■□□□□ 0.37
LMNB1-203ENST00000460265 BIN2Q9UBW5 565 aaPredicted RBP17.37■□□□□ 0.37
LMNB1-203ENST00000460265 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 BMP15O95972 392 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 GNAQP50148 359 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 CCDC47Q96A33 483 aaKnown RBP17.36■□□□□ 0.37
LMNB1-203ENST00000460265 BAG1Q99933 345 aaPredicted RBP17.36■□□□□ 0.37
LMNB1-203ENST00000460265 DISP2A7MBM2 1401 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 PP2D1A8MPX8 630 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 PRR5LQ6MZQ0 368 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 SRLQ86TD4 932 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 CLEC10AQ8IUN9 316 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 IMPACTQ9P2X3 320 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 LEMD3Q9Y2U8 911 aa17.36■□□□□ 0.37
LMNB1-203ENST00000460265 PKN1Q16512 942 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 LRRN4CLQ8ND94 238 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
LMNB1-203ENST00000460265 WNT7AO00755 349 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 GUCY2CP25092 1073 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 BANK1Q8NDB2 785 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 FERMT2Q96AC1 680 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
LMNB1-203ENST00000460265 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
LMNB1-203ENST00000460265 IKBKBO14920 756 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 TXKP42681 527 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 SMC1AQ14683 1233 aaKnown RBP17.35■□□□□ 0.37
LMNB1-203ENST00000460265 MXD3Q9BW11 206 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 MAGEC2Q9UBF1 373 aaPredicted RBP17.35■□□□□ 0.37
LMNB1-203ENST00000460265 HPSEQ9Y251 543 aa17.35■□□□□ 0.37
LMNB1-203ENST00000460265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.35■□□□□ 0.378e-7■■■□□ 17.8
LMNB1-203ENST00000460265 ABCC6O95255 1503 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 TNNI2P48788 182 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 IGSF22Q8N9C0 903 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 GOLGA5Q8TBA6 731 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 SYNRGQ9UMZ2 1314 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 SMCO2A6NFE2 343 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 MMP14P50281 582 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 CCZ1BP86790 482 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 CCZ1P86791 482 aaPredicted RBP17.34■□□□□ 0.37
LMNB1-203ENST00000460265 NCAPHQ15003 741 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 E2F4Q16254 413 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 SLC10A5Q5PT55 438 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 CCDC148Q8NFR7 591 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 RRP36Q96EU6 259 aaKnown RBP17.34■□□□□ 0.37
LMNB1-203ENST00000460265 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms