RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 PPP1R11O60927 126 aaPredicted RBP16.61■□□□□ 0.25
PCNP-202ENST00000460231 NDUFB10O96000 172 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 NCLP19338 710 aaKnown RBP16.61■□□□□ 0.25
PCNP-202ENST00000460231 KLRC3Q07444 240 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 ZNF543Q08ER8 600 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 MKL1Q969V6 931 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 PIGSQ96S52 555 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 NYAP2Q9P242 653 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 DEXIO95424 95 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 EPHX2P34913 555 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 TNNI2P48788 182 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 TNFAIP1Q13829 316 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 MYH15Q9Y2K3 1946 aa16.61■□□□□ 0.25
PCNP-202ENST00000460231 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
PCNP-202ENST00000460231 WWC2Q6AWC2 1192 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 CPLX2Q6PUV4 134 aaKnown RBP16.6■□□□□ 0.25
PCNP-202ENST00000460231 TRIM22Q8IYM9 498 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 GBP4Q96PP9 640 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 USP17L10C9JJH3 530 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
PCNP-202ENST00000460231 CCDC178Q5BJE1 867 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 USP28Q96RU2 1077 aa16.6■□□□□ 0.25
PCNP-202ENST00000460231 MMP1P03956 469 aa16.59■□□□□ 0.25
PCNP-202ENST00000460231 KIF5BP33176 963 aa16.59■□□□□ 0.25
PCNP-202ENST00000460231 PFKFB3Q16875 520 aaPredicted RBP16.59■□□□□ 0.25
PCNP-202ENST00000460231 SLFN13Q68D06 897 aa16.59■□□□□ 0.25
PCNP-202ENST00000460231 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
PCNP-202ENST00000460231 RASGRP4Q8TDF6 673 aa16.59■□□□□ 0.25
PCNP-202ENST00000460231 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
PCNP-202ENST00000460231 TAF1DQ9H5J8 278 aaPredicted RBP16.59■□□□□ 0.25
PCNP-202ENST00000460231 SCG2P13521 617 aa16.58■□□□□ 0.25
PCNP-202ENST00000460231 CCDC96Q2M329 555 aa16.58■□□□□ 0.25
PCNP-202ENST00000460231 ADGRF4Q8IZF3 695 aa16.58■□□□□ 0.25
PCNP-202ENST00000460231 WRNIP1Q96S55 665 aa16.58■□□□□ 0.25
PCNP-202ENST00000460231 PHF20Q9BVI0 1012 aa16.58■□□□□ 0.25
PCNP-202ENST00000460231 JMJD4Q9H9V9 463 aa16.58■□□□□ 0.25
PCNP-202ENST00000460231 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.25
PCNP-202ENST00000460231 MMP14P50281 582 aa16.58■□□□□ 0.24
PCNP-202ENST00000460231 APOBEC3FQ8IUX4 373 aaKnown RBP16.58■□□□□ 0.24
PCNP-202ENST00000460231 DIS3L2Q8IYB7 885 aaKnown RBP16.58■□□□□ 0.24
PCNP-202ENST00000460231 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
PCNP-202ENST00000460231 CABP5Q9NP86 173 aa16.58■□□□□ 0.24
PCNP-202ENST00000460231 CLIC4Q9Y696 253 aa16.58■□□□□ 0.24
PCNP-202ENST00000460231 SLC1A4P43007 532 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 NT5C2P49902 561 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 TOB1P50616 345 aaPredicted RBP16.57■□□□□ 0.24
PCNP-202ENST00000460231 PPP2R5BQ15173 497 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 ZNF526Q8TF50 670 aaPredicted RBP16.57■□□□□ 0.24
PCNP-202ENST00000460231 COA7Q96BR5 231 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 ZNF341Q9BYN7 854 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 RIOX1Q9H6W3 641 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 FBXO28Q9NVF7 368 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 TRAF5O00463 557 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 HEATR3Q7Z4Q2 680 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 SPZ1Q9BXG8 430 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 GZF1Q9H116 711 aaPredicted RBP16.57■□□□□ 0.24
PCNP-202ENST00000460231 RBM27Q9P2N5 1060 aaKnown RBP16.57■□□□□ 0.24
PCNP-202ENST00000460231 TMX2Q9Y320 296 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 MRVI1Q9Y6F6 885 aa16.57■□□□□ 0.24
PCNP-202ENST00000460231 STXBP3O00186 592 aa16.56■□□□□ 0.24
PCNP-202ENST00000460231 TRAK2O60296 914 aa16.56■□□□□ 0.24
PCNP-202ENST00000460231 USP2O75604 605 aaPredicted RBP16.56■□□□□ 0.24
PCNP-202ENST00000460231 FAM83BQ5T0W9 1011 aa16.56■□□□□ 0.24
PCNP-202ENST00000460231 OTOFQ9HC10 1997 aa16.56■□□□□ 0.24
PCNP-202ENST00000460231 U2AF2P26368 475 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCNP-202ENST00000460231 MAP1SQ66K74 1059 aaPredicted RBP16.55■□□□□ 0.24
PCNP-202ENST00000460231 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
PCNP-202ENST00000460231 TNFRSF25Q93038 417 aa16.55■□□□□ 0.24
PCNP-202ENST00000460231 PGBD1Q96JS3 809 aa16.55■□□□□ 0.24
PCNP-202ENST00000460231 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
PCNP-202ENST00000460231 PHIPQ8WWQ0 1821 aa16.55■□□□□ 0.24
PCNP-202ENST00000460231 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
PCNP-202ENST00000460231 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
PCNP-202ENST00000460231 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.55■□□□□ 0.24
PCNP-202ENST00000460231 GMCL1P1Q8NEA9 526 aa16.55■□□□□ 0.24
PCNP-202ENST00000460231 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
PCNP-202ENST00000460231 TMEM232C9JQI7 657 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 ASPRV1Q53RT3 343 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
PCNP-202ENST00000460231 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
PCNP-202ENST00000460231 ASNSP08243 561 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 PTPRAP18433 802 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 MTMR2Q13614 643 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCNP-202ENST00000460231 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 PAPPA2Q9BXP8 1791 aa16.54■□□□□ 0.24
PCNP-202ENST00000460231 PITPNM2Q9BZ72 1349 aa16.53■□□□□ 0.24
PCNP-202ENST00000460231 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
PCNP-202ENST00000460231 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
PCNP-202ENST00000460231 ATP2B1P20020 1258 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms