RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 PRC1O43663 620 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 FLOT1O75955 427 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
CCDC12-204ENST00000460035 SEC24BO95487 1268 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 SLC1A4P43007 532 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 COG2Q14746 738 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 WTAPQ15007 396 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 SEC23AQ15436 765 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 ADCK5Q3MIX3 580 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 ENAHQ8N8S7 591 aaPredicted RBP12.74□□□□□ -0.37
CCDC12-204ENST00000460035 JAKMIP1Q96N16 626 aaKnown RBP12.74□□□□□ -0.37
CCDC12-204ENST00000460035 PLXNA1Q9UIW2 1896 aa12.74□□□□□ -0.37
CCDC12-204ENST00000460035 MYPNQ86TC9 1320 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 FKTNO75072 461 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 BMP3P12645 472 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 PSMA5P28066 241 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 GCLCP48506 637 aaPredicted RBP12.73□□□□□ -0.37
CCDC12-204ENST00000460035 ANTXR2P58335 489 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 HERVK_113P62684 666 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 SP3Q02447 781 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 IKQ13123 557 aaPredicted RBP12.73□□□□□ -0.37
CCDC12-204ENST00000460035 CCDC96Q2M329 555 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 C17orf99Q6UX52 265 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
CCDC12-204ENST00000460035 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 ZNF296Q8WUU4 475 aaPredicted RBP12.73□□□□□ -0.37
CCDC12-204ENST00000460035 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
CCDC12-204ENST00000460035 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 HMGB1P09429 215 aaKnown RBP12.72□□□□□ -0.37
CCDC12-204ENST00000460035 BCRP11274 1271 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 DSG3P32926 999 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 FGD1P98174 961 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 KIF22Q14807 665 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 NFXL1Q6ZNB6 911 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 KCTD1Q719H9 257 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 IGDCC4Q8TDY8 1250 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 GTF3C2Q8WUA4 911 aaPredicted RBP12.72□□□□□ -0.37
CCDC12-204ENST00000460035 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 KIFC2Q96AC6 838 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 GMCL1Q96IK5 515 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 TMEM87BQ96K49 555 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 TCEANC2Q96MN5 208 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
CCDC12-204ENST00000460035 FBXO28Q9NVF7 368 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 FEM1BQ9UK73 627 aa12.72□□□□□ -0.37
CCDC12-204ENST00000460035 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
CCDC12-204ENST00000460035 RBBP6Q7Z6E9 1792 aaKnown RBP12.71□□□□□ -0.37
CCDC12-204ENST00000460035 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.37
CCDC12-204ENST00000460035 PEX10O60683 326 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 CPA1P15085 419 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 EXOSC10Q01780 885 aaKnown RBP12.71□□□□□ -0.37
CCDC12-204ENST00000460035 COL9A3Q14050 684 aaPredicted RBP12.71□□□□□ -0.37
CCDC12-204ENST00000460035 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 RASGRP2Q7LDG7 609 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 CCAR1Q8IX12 1150 aaKnown RBP12.71□□□□□ -0.37
CCDC12-204ENST00000460035 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 GPRC5AQ8NFJ5 357 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 CHURC1Q8WUH1 139 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 ATG4CQ96DT6 458 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 IL17RAQ96F46 866 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 SLF1Q9BQI6 1058 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 SENP2Q9HC62 589 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 RBPJLQ9UBG7 517 aa12.71□□□□□ -0.37
CCDC12-204ENST00000460035 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
CCDC12-204ENST00000460035 ZNF236Q9UL36 1845 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 SH2B2O14492 632 aaPredicted RBP12.7□□□□□ -0.38
CCDC12-204ENST00000460035 PLA2G6O60733 806 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 PDHBP11177 359 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
CCDC12-204ENST00000460035 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 PLS1Q14651 629 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 FAM110CQ1W6H9 321 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 Q3C1V9 767 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 TTBK2Q6IQ55 1244 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 CATIPQ7Z7H3 387 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 PRPF38AQ8NAV1 312 aaKnown RBP12.7□□□□□ -0.38
CCDC12-204ENST00000460035 CD99L2Q8TCZ2 262 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 NUP133Q8WUM0 1156 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 ERO1AQ96HE7 468 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 TXNRD2Q9NNW7 524 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 MORF4L1Q9UBU8 362 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 PPP1R9AQ9ULJ8 1098 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 RABGAP1Q9Y3P9 1069 aa12.7□□□□□ -0.38
CCDC12-204ENST00000460035 ZBED4O75132 1171 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 FMNL1O95466 1100 aaPredicted RBP12.69□□□□□ -0.38
CCDC12-204ENST00000460035 PARP1P09874 1014 aaKnown RBP12.69□□□□□ -0.38
CCDC12-204ENST00000460035 SLC16A2P36021 539 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 LIFRP42702 1097 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 STAT2P52630 851 aa12.69□□□□□ -0.38
CCDC12-204ENST00000460035 ANAPC15P60006 121 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms