RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 NRBP2Q9NSY0 501 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 LUC7L2Q9Y383 392 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 DLC1Q96QB1 1528 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 EEF2P13639 858 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 HSP90AA4PQ58FG1 418 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 SLFN13Q68D06 897 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 ELMSAN1Q6PJG2 1045 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 RPAINQ86UA6 219 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 PIGBQ92521 554 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 FAM193BQ96PV7 902 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 RBSNQ9H1K0 784 aa11.92□□□□□ -0.5
AMBRA1-202ENST00000458649 CETN3O15182 167 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 DTNBO60941 627 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 ZNF174Q15697 407 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 SNX29Q8TEQ0 813 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 AGLP35573 1532 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 BCAMP50895 628 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 DNA2P51530 1060 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 LMNTD2Q8IXW0 634 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 ARFGAP2Q8N6H7 521 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 CDHR1Q96JP9 859 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 RGS12O14924 1447 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 TXKP42681 527 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 DNAJC21Q5F1R6 531 aaKnown RBP11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 CCDC50Q8IVM0 306 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 SLFN12Q8IYM2 578 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 GABPB2Q8TAK5 448 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 DEPTORQ8TB45 409 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 NAP1L3Q99457 506 aaPredicted RBP11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 CTAGE15A4D2H0 777 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 TACC1O75410 805 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 DDAH1O94760 285 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 CTAGE8P0CG41 777 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 VPS72Q15906 364 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 CTAGE6Q86UF2 777 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 CTAGE4Q8IX94 777 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 KANSL2Q9H9L4 492 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 TPCN1Q9ULQ1 816 aa11.91□□□□□ -0.5
AMBRA1-202ENST00000458649 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 TRAF5O00463 557 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 GCKP35557 465 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 FAM182BQ5T319 152 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 B4GALNT4Q76KP1 1039 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 CLTCQ00610 1675 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 KRT40Q6A162 431 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 ZSCAN10Q96SZ4 725 aaPredicted RBP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 CLSTN2Q9H4D0 955 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 DNAI1Q9UI46 699 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 CCPG1Q9ULG6 757 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 GADD45BO75293 160 aaPredicted RBP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 RBBP5Q15291 538 aaKnown RBP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 CD2APQ9Y5K6 639 aa11.9□□□□□ -0.5
AMBRA1-202ENST00000458649 FGAP02671 866 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 HOXD10P28358 340 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 INPP5BP32019 993 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 ASPRV1Q53RT3 343 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 PHKBQ93100 1093 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 RNF34Q969K3 372 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 CCDC77Q9BR77 488 aa11.9□□□□□ -0.51
AMBRA1-202ENST00000458649 CRB1P82279 1406 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 XPOTO43592 962 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 PSTPIP2Q9H939 334 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 ZMYM1Q5SVZ6 1142 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 LIN9Q5TKA1 542 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 PPFIBP2Q8ND30 876 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 DBNDD1Q9H9R9 158 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 PFKFB2O60825 505 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 YARSP54577 528 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 DCAF17Q5H9S7 520 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 CCDC42Q96M95 316 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 JADE2Q9NQC1 790 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 CUTAO60888 179 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 SASH1O94885 1247 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 ADORA1P30542 326 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 LACTBP83111 547 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 TFDP1Q14186 410 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 ZNF654Q8IZM8 581 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 PNMA1Q8ND90 353 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 AMNQ9BXJ7 453 aa11.89□□□□□ -0.51
AMBRA1-202ENST00000458649 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
AMBRA1-202ENST00000458649 SMCO2A6NFE2 343 aa11.88□□□□□ -0.51
AMBRA1-202ENST00000458649 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
AMBRA1-202ENST00000458649 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
AMBRA1-202ENST00000458649 FOXP4Q8IVH2 680 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms