RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 EFCAB8A8MWE9 144 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 TRAPPC10P48553 1259 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 C4orf32Q8N8J7 132 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 GPKOWQ92917 476 aaPredicted RBP eCLIP23.42■■□□□ 1.34
CRAT-207ENST00000458362 NLRP3Q96P20 1036 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 IRX2Q9BZI1 471 aaPredicted RBP23.42■■□□□ 1.34
CRAT-207ENST00000458362 EPC1Q9H2F5 836 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 MCM9Q9NXL9 1143 aa23.42■■□□□ 1.34
CRAT-207ENST00000458362 CNTNAP4Q9C0A0 1308 aa23.41■■□□□ 1.34
CRAT-207ENST00000458362 RRAGBQ5VZM2 374 aa23.41■■□□□ 1.34
CRAT-207ENST00000458362 ANKRD2Q9GZV1 360 aa23.41■■□□□ 1.34
CRAT-207ENST00000458362 IL17RBQ9NRM6 502 aa23.41■■□□□ 1.34
CRAT-207ENST00000458362 MRFAP1Q9Y605 127 aa23.41■■□□□ 1.34
CRAT-207ENST00000458362 COL24A1Q17RW2 1714 aa23.41■■□□□ 1.34
CRAT-207ENST00000458362 IRS2Q9Y4H2 1338 aa23.41■■□□□ 1.34
CRAT-207ENST00000458362 MFAP3LO75121 409 aa23.4■■□□□ 1.34
CRAT-207ENST00000458362 NBPF5PQ86XG9 351 aaPredicted RBP23.4■■□□□ 1.34
CRAT-207ENST00000458362 ADGRG1Q9Y653 693 aa23.4■■□□□ 1.34
CRAT-207ENST00000458362 GTPBP6O43824 516 aaPredicted RBP23.4■■□□□ 1.34
CRAT-207ENST00000458362 CDC25AP30304 524 aa23.4■■□□□ 1.34
CRAT-207ENST00000458362 CCT6AP40227 531 aaKnown RBP23.4■■□□□ 1.34
CRAT-207ENST00000458362 STAG2Q8N3U4 1231 aa23.4■■□□□ 1.34
CRAT-207ENST00000458362 RASGRP4Q8TDF6 673 aa23.4■■□□□ 1.34
CRAT-207ENST00000458362 CTAGE1Q96RT6 745 aa23.4■■□□□ 1.34
CRAT-207ENST00000458362 CCDC175P0C221 793 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 CASP14P31944 242 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 TFAP4Q01664 338 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 BMS1Q14692 1282 aaKnown RBP23.39■■□□□ 1.34
CRAT-207ENST00000458362 KRT31Q15323 416 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 BLIDQ8IZY5 108 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 DYNLL2Q96FJ2 89 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 SETDB2Q96T68 719 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 NARFQ9UHQ1 456 aa23.39■■□□□ 1.34
CRAT-207ENST00000458362 MYH8P13535 1937 aa23.39■■□□□ 1.33
CRAT-207ENST00000458362 GYPCP04921 128 aa23.39■■□□□ 1.33
CRAT-207ENST00000458362 FXR1P51114 621 aaKnown RBP eCLIP23.39■■□□□ 1.33
CRAT-207ENST00000458362 TYW1BQ6NUM6 668 aa23.39■■□□□ 1.33
CRAT-207ENST00000458362 NYXQ9GZU5 481 aa23.39■■□□□ 1.33
CRAT-207ENST00000458362 KAT14Q9H8E8 782 aa23.39■■□□□ 1.33
CRAT-207ENST00000458362 ZRANB2O95218 330 aaKnown RBP eCLIP23.38■■□□□ 1.33
CRAT-207ENST00000458362 PNMA6AP0CW24 399 aaPredicted RBP23.38■■□□□ 1.33
CRAT-207ENST00000458362 TM4SF1P30408 202 aa23.38■■□□□ 1.33
CRAT-207ENST00000458362 KIF5BP33176 963 aa23.38■■□□□ 1.33
CRAT-207ENST00000458362 PPP2R3AQ06190 1150 aa23.38■■□□□ 1.33
CRAT-207ENST00000458362 SLC35G1Q2M3R5 365 aa23.38■■□□□ 1.33
CRAT-207ENST00000458362 FILIP1LQ4L180 1135 aa23.38■■□□□ 1.33
CRAT-207ENST00000458362 LZTFL1Q9NQ48 299 aa23.38■■□□□ 1.33
CRAT-207ENST00000458362 LIMA1Q9UHB6 759 aaKnown RBP23.38■■□□□ 1.33
CRAT-207ENST00000458362 MKRN1Q9UHC7 482 aaKnown RBP23.38■■□□□ 1.33
CRAT-207ENST00000458362 DZIP1Q86YF9 867 aaKnown RBP23.38■■□□□ 1.33
CRAT-207ENST00000458362 RWDD2AQ9UIY3 292 aa23.38■■□□□ 1.33
CRAT-207ENST00000458362 SBF2Q86WG5 1849 aa23.37■■□□□ 1.33
CRAT-207ENST00000458362 FAM98CQ17RN3 349 aaKnown RBP23.37■■□□□ 1.33
CRAT-207ENST00000458362 C12orf60Q5U649 245 aa23.37■■□□□ 1.33
CRAT-207ENST00000458362 NAA15Q9BXJ9 866 aaKnown RBP23.37■■□□□ 1.33
CRAT-207ENST00000458362 ZBTB22O15209 634 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 RPN1P04843 607 aaKnown RBP23.36■■□□□ 1.33
CRAT-207ENST00000458362 CALML3P27482 149 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 TMED8Q6PL24 325 aaPredicted RBP23.36■■□□□ 1.33
CRAT-207ENST00000458362 PNMA1Q8ND90 353 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 SH3RF3Q8TEJ3 882 aaPredicted RBP23.36■■□□□ 1.33
CRAT-207ENST00000458362 CCDC12Q8WUD4 166 aaPredicted RBP23.36■■□□□ 1.33
CRAT-207ENST00000458362 NELFBQ8WX92 580 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 GDAQ9Y2T3 454 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 RNF225M0QZC1 329 aaPredicted RBP23.36■■□□□ 1.33
CRAT-207ENST00000458362 ARL6IP4Q66PJ3 421 aaKnown RBP23.36■■□□□ 1.33
CRAT-207ENST00000458362 RSRC2Q7L4I2 434 aaKnown RBP23.36■■□□□ 1.33
CRAT-207ENST00000458362 VPS16Q9H269 839 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 TAB2Q9NYJ8 693 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 PCDHA4Q9UN74 947 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 ITIH6Q6UXX5 1313 aa23.36■■□□□ 1.33
CRAT-207ENST00000458362 SEC31AO94979 1220 aaKnown RBP23.35■■□□□ 1.33
CRAT-207ENST00000458362 LONP1P36776 959 aaKnown RBP23.35■■□□□ 1.33
CRAT-207ENST00000458362 PAK1Q13153 545 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 TERF2Q15554 542 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 ZNF658Q5TYW1 1059 aaPredicted RBP23.35■■□□□ 1.33
CRAT-207ENST00000458362 AMIGO3Q86WK7 504 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 MAPK8IP1Q9UQF2 711 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 TNRC6CQ9HCJ0 1690 aaKnown RBP23.35■■□□□ 1.33
CRAT-207ENST00000458362 USP17L3A6NCW0 530 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 USP17L4A6NCW7 530 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 LRRC10BA6NIK2 292 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 M0R2N6 131 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 FECHP22830 423 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 PLA2G4AP47712 749 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 COPB1P53618 953 aaKnown RBP23.35■■□□□ 1.33
CRAT-207ENST00000458362 GRM4Q14833 912 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 GRIK5Q16478 980 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 TEX35Q5T0J7 233 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 TMCO3Q6UWJ1 677 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 USP17L1Q7RTZ2 530 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 DGKHQ86XP1 1220 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 PYM1Q9BRP8 204 aaKnown RBP23.35■■□□□ 1.33
CRAT-207ENST00000458362 ARGLU1Q9NWB6 273 aaPredicted RBP23.35■■□□□ 1.33
CRAT-207ENST00000458362 MAD2L2Q9UI95 211 aa23.35■■□□□ 1.33
CRAT-207ENST00000458362 N4BP3O15049 544 aa23.34■■□□□ 1.33
CRAT-207ENST00000458362 RPS6KA4O75676 772 aa23.34■■□□□ 1.33
CRAT-207ENST00000458362 ZNF771Q7L3S4 317 aaPredicted RBP23.34■■□□□ 1.33
CRAT-207ENST00000458362 RASGRP2Q7LDG7 609 aa23.34■■□□□ 1.33
CRAT-207ENST00000458362 ANKS1AQ92625 1134 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms