RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	PPM1G	O15355	546 aa	Predicted RBP	6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	ANP32C	O43423	234 aa		6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	CEACAM5	P06731	702 aa		6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	FBLN1	P23142	703 aa		6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	EIF1AX	P47813	144 aa	Known RBP	6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	CHRNA2	Q15822	529 aa		6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	TMEM164	Q5U3C3	297 aa		6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	DIEXF	Q68CQ4	756 aa	Known RBP	6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	PRDM11	Q9NQV5	511 aa		6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	RTL1	A6NKG5	1358 aa		6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	COL3A1	P02461	1466 aa	Predicted RBP	6.28	□□□□□ -1.4
COL21A1-204	ENST00000456983	MAP3K19	Q56UN5	1328 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	CAMTA1	Q9Y6Y1	1673 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	FAM13A	O94988	1023 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	GC	P02774	474 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	ZSCAN22	P10073	491 aa	Predicted RBP	6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	MPZL3	Q6UWV2	235 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	CCNJL	Q8IV13	435 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	KCNH5	Q8NCM2	988 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	C8orf37	Q96NL8	207 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	KRTAP4-5	Q9BYR2	181 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	LIN7B	Q9HAP6	207 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	POLI	Q9UNA4	740 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	CPD	O75976	1380 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	FLT4	P35916	1363 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	AATK	Q6ZMQ8	1374 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	RGPD1	P0DJD0	1748 aa		6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	COL5A2	P05997	1499 aa	Predicted RBP	6.27	□□□□□ -1.41
COL21A1-204	ENST00000456983	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	BLM	P54132	1417 aa	Predicted RBP	6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	PARP4	Q9UKK3	1724 aa	Known RBP	6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983		A6NHS1	94 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	B3GALT4	O96024	378 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	CFP	P27918	469 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	AMPH	P49418	695 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	WFDC3	Q8IUB2	231 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	CCDC120	Q96HB5	630 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	LGR6	Q9HBX8	967 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	SEPT3	Q9UH03	358 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	GTF2IRD1	Q9UHL9	959 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	PCOLCE2	Q9UKZ9	415 aa		6.26	□□□□□ -1.41
COL21A1-204	ENST00000456983	DYNC1LI2	O43237	492 aa	Predicted RBP	6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	PPP2R1A	P30153	589 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	ID3	Q02535	119 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	ZNF423	Q2M1K9	1284 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	PEAR1	Q5VY43	1037 aa	Predicted RBP	6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	FAM181A	Q8N9Y4	354 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	LTV1	Q96GA3	475 aa	Predicted RBP	6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	WDR18	Q9BV38	432 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	PRKRIP1	Q9H875	184 aa	Predicted RBP	6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	ZFYVE28	Q9HCC9	887 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	SSU72	Q9NP77	194 aa	Known RBP	6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	ADAMTS6	Q9UKP5	1117 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	LRRC37A3	O60309	1634 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	SLIT2	O94813	1529 aa		6.25	□□□□□ -1.41
COL21A1-204	ENST00000456983	RNGTT	O60942	597 aa	Known RBP	6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	MPST	P25325	297 aa		6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	HOXC9	P31274	260 aa		6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	PTPN12	Q05209	780 aa	Known RBP	6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	CDK5R2	Q13319	367 aa		6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	RALBP1	Q15311	655 aa		6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	POLK	Q9UBT6	870 aa		6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	AFF2	P51816	1311 aa		6.24	□□□□□ -1.41
COL21A1-204	ENST00000456983	GLI3	P10071	1580 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	INSR	P06213	1382 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	KIF24	Q5T7B8	1368 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	METTL12	A8MUP2	240 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	GLI1	P08151	1106 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	MTHFS	P49914	203 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	IKZF1	Q13422	519 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	LCE5A	Q5TCM9	118 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	ARHGEF25	Q86VW2	580 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	GALNT12	Q8IXK2	581 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	FBXO15	Q8NCQ5	510 aa	Predicted RBP	6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	ANKRD24	Q8TF21	1146 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	CFAP53	Q96M91	514 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	BTG4	Q9NY30	223 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	CRIM1	Q9NZV1	1036 aa		6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.23	□□□□□ -1.41
COL21A1-204	ENST00000456983	SHANK3	Q9BYB0	1731 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	FAM83G	A6ND36	823 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	TMPRSS2	O15393	492 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	TMEM253	P0C7T8	217 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	OXCT1	P55809	520 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	ZP2	Q05996	745 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	SF3B2	Q13435	895 aa	Known RBP	6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	HSP90AB2P	Q58FF8	381 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	TMEM67	Q5HYA8	995 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	USHBP1	Q8N6Y0	703 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	MRS2	Q9HD23	443 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	LATS2	Q9NRM7	1088 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	KRT82	Q9NSB4	513 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	USP35	Q9P2H5	1018 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	CCDC9	Q9Y3X0	531 aa	Known RBP	6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	THSD7A	Q9UPZ6	1657 aa		6.22	□□□□□ -1.41
COL21A1-204	ENST00000456983	CRB1	P82279	1406 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms