RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ATP10DQ9P241 1426 aa6.32□□□□□ -1.4
HMGB1P4-201ENST00000455362 PPFIA4O75335 1185 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 ASMTLO95671 621 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 GNAI2P04899 355 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 KRT18P05783 430 aaKnown RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 PAX3P23760 479 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 GNALP38405 381 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 IL6STP40189 918 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 CRKLP46109 303 aaKnown RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 CDKN1CP49918 316 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 EIF5P55010 431 aaKnown RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 EIF6P56537 245 aaKnown RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 NEXNQ0ZGT2 675 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 CT47A1Q5JQC4 288 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 SLC27A3Q5K4L6 730 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 PDE12Q6L8Q7 609 aaKnown RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 SYNPOQ8N3V7 929 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 CHAC2Q8WUX2 184 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 EVI5LQ96CN4 794 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 MRGPRX2Q96LB1 330 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 TOR4AQ9NXH8 423 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 ANKIB1Q9P2G1 1089 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 ZBTB1Q9Y2K1 713 aa6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 CICQ96RK0 1608 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 IBTKQ9P2D0 1353 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P4-201ENST00000455362 NUP98P52948 1817 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 NEURL1BA8MQ27 555 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 ALG1L2C9J202 215 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 TGFBR3LH3BV60 316 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 ALDH1A1P00352 501 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 NBPF7P0C2Y1 421 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 UBTFL1P0CB47 393 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 KCNQ4P56696 695 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 TRIM28Q13263 835 aaKnown RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 GCKRQ14397 625 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 FXNQ16595 210 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 CWF19L2Q2TBE0 894 aaKnown RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 FBXW10Q5XX13 1052 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 LARP1BQ659C4 914 aaKnown RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 PPP4R4Q6NUP7 873 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 TEX2Q8IWB9 1127 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 GALNT12Q8IXK2 581 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 RPAP2Q8IXW5 612 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 RAVER1Q8IY67 606 aaKnown RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 ANKRD44Q8N8A2 993 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 GOLM1Q8NBJ4 401 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 LINC00116Q8NCU8 138 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 AIDAQ96BJ3 306 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 MYD88Q99836 296 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 EHD4Q9H223 541 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 ELP3Q9H9T3 547 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 MCM8Q9UJA3 840 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 PPT2Q9UMR5 302 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 GPC6Q9Y625 555 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 ARFGEF2Q9Y6D5 1785 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 LY75O60449 1722 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 COL5A3P25940 1745 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 NUP188Q5SRE5 1749 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 RREB1Q92766 1687 aa6.3□□□□□ -1.4
HMGB1P4-201ENST00000455362 AFDNP55196 1824 aaKnown RBP6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 TAF1LQ8IZX4 1826 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 UTYO14607 1347 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 MAP3K15Q6ZN16 1313 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 ERVV-1B6SEH8 477 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 GRM8O00222 908 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 PF4P02776 101 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 PLA2G4AP47712 749 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 EPHB1P54762 984 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 FCGRTP55899 365 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 ATP8B2P98198 1209 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 SEPT6Q14141 434 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 BRD3Q15059 726 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 PPP2R5AQ15172 486 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 IER5Q5VY09 327 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 CEP85Q6P2H3 762 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 KIF6Q6ZMV9 814 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 Q6ZVU0 165 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 SV2BQ7L1I2 683 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 RHOVQ96L33 236 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 FERD3LQ96RJ6 166 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 MPHOSPH6Q99547 160 aaKnown RBP6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 ISCA1Q9BUE6 129 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 KCNQ5Q9NR82 932 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 ZDHHC3Q9NYG2 299 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 PFDN2Q9UHV9 154 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 CCNL1Q9UK58 526 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 PPM1HQ9ULR3 514 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 HDAC5Q9UQL6 1122 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 AKAP2Q9Y2D5 859 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 CD2APQ9Y5K6 639 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 LRRFIP2Q9Y608 721 aaKnown RBP6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 PTCH2Q9Y6C5 1203 aa6.29□□□□□ -1.4
HMGB1P4-201ENST00000455362 CNTNAP4Q9C0A0 1308 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms