RNA–Protein interactions for RNA: ENST00000454220.6

PPP2R1A-203, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 1 (best)

Gene PPP2R1A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-203ENST00000454220 KIAA1755Q5JYT7 1200 aa18.3■□□□□ 0.52
PPP2R1A-203ENST00000454220 PARK7Q99497 189 aaKnown RBP18.3■□□□□ 0.52
PPP2R1A-203ENST00000454220 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
PPP2R1A-203ENST00000454220 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
PPP2R1A-203ENST00000454220 TMEM106CQ9BVX2 250 aa18.3■□□□□ 0.52
PPP2R1A-203ENST00000454220 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
PPP2R1A-203ENST00000454220 WDR46O15213 610 aaKnown RBP18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 OSBPP22059 807 aa18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 KIF22Q14807 665 aa18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 SART3Q15020 963 aaKnown RBP18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 ENAHQ8N8S7 591 aaPredicted RBP18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 NEK1Q96PY6 1258 aa18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 ASCC2Q9H1I8 757 aaPredicted RBP18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 PCDH10Q9P2E7 1040 aa18.29■□□□□ 0.52
PPP2R1A-203ENST00000454220 TNKSO95271 1327 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 ERICH2A1L162 156 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 IFIT3O14879 490 aaKnown RBP18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 SEC24BO95487 1268 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 NDUFB10O96000 172 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 IRX3P78415 501 aaPredicted RBP18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 SEC23AQ15436 765 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 NBPF11Q86T75 865 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 SPICE1Q8N0Z3 855 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 CPA4Q9UI42 421 aa18.28■□□□□ 0.52
PPP2R1A-203ENST00000454220 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 ADGRA2Q96PE1 1338 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 PRC1O43663 620 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 PSMA5P28066 241 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 ANTXR2P58335 489 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 SLFN13Q68D06 897 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 GMCL1Q96IK5 515 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 TMEM87BQ96K49 555 aa18.27■□□□□ 0.52
PPP2R1A-203ENST00000454220 RAD21O60216 631 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 CYP2C8P10632 490 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 CTGFP29279 349 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 ANAPC15P60006 121 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 TMEM67Q5HYA8 995 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 C17orf99Q6UX52 265 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 DHX32Q7L7V1 743 aaKnown RBP18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 GTF3C2Q8WUA4 911 aaPredicted RBP18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 TANGO6Q9C0B7 1094 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 KAT14Q9H8E8 782 aa18.26■□□□□ 0.51
PPP2R1A-203ENST00000454220 DOCK3Q8IZD9 2030 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 CEP290O15078 2479 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 COG2Q14746 738 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 WTAPQ15007 396 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 FAM83BQ5T0W9 1011 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 TMTC2Q8N394 836 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 PNMA1Q8ND90 353 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 SMCR8Q8TEV9 937 aaPredicted RBP18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 DCAF4Q8WV16 495 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 P2RX7Q99572 595 aaKnown RBP18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 HOXC10Q9NYD6 342 aa18.25■□□□□ 0.51
PPP2R1A-203ENST00000454220 MYPNQ86TC9 1320 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 GNRH1P01148 92 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 BMP3P12645 472 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 SLC1A4P43007 532 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 HERVK_113P62684 666 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 COL9A3Q14050 684 aaPredicted RBP18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 LBX2Q6XYB7 198 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 IL17RAQ96F46 866 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 TRIM47Q96LD4 638 aa18.24■□□□□ 0.51
PPP2R1A-203ENST00000454220 RLFQ13129 1914 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 PLA2G6O60733 806 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 FLOT1O75955 427 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 SNHG28P0DPA3 235 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 LIFRP42702 1097 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 PSMC4P43686 418 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 HABP4Q5JVS0 413 aaKnown RBP18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 BLOC1S2Q6QNY1 142 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 NUP88Q99567 741 aaPredicted RBP18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 LY9Q9HBG7 655 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 FEM1BQ9UK73 627 aa18.23■□□□□ 0.51
PPP2R1A-203ENST00000454220 SH2B2O14492 632 aaPredicted RBP18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 PDHBP11177 359 aa18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 BCRP11274 1271 aa18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 DSG3P32926 999 aa18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 PRMT2P55345 433 aa18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 CHURC1Q8WUH1 139 aa18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 ZSWIM6Q9HCJ5 1215 aa18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 SRRDQ9UH36 339 aa18.22■□□□□ 0.51
PPP2R1A-203ENST00000454220 PARP14Q460N5 1801 aa18.21■□□□□ 0.51
PPP2R1A-203ENST00000454220 SPDYE16A6NNV3 312 aaPredicted RBP18.21■□□□□ 0.51
PPP2R1A-203ENST00000454220 CASTP20810 708 aaKnown RBP18.21■□□□□ 0.51
PPP2R1A-203ENST00000454220 RPS6KB1P23443 525 aa18.21■□□□□ 0.51
PPP2R1A-203ENST00000454220 MTFR1Q15390 333 aa18.21■□□□□ 0.51
PPP2R1A-203ENST00000454220 GPATCH4Q5T3I0 446 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms