RNA–Protein interactions for RNA: ENST00000451060.6

POLDIP3-205, Transcript of DNA polymerase delta interacting protein 3, human

TSL 2 BASIC

Gene POLDIP3, Length 3,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLDIP3-205	ENST00000451060	PRCP	P42785	496 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	PAK1	Q13153	545 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	PP2D1	A8MPX8	630 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	SYF2	O95926	243 aa	Known RBP	12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	PIP4K2B	P78356	416 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	CHD4	Q14839	1912 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	RCCD1	A6NED2	376 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	IL2RB	P14784	551 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	FGFR2	P21802	821 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	CYP7A1	P22680	504 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	HERVK_113	P62684	666 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	NPY5R	Q15761	445 aa		12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	GNL3L	Q9NVN8	582 aa	Known RBP	12.53	□□□□□ -0.4
POLDIP3-205	ENST00000451060	DYNLL1	P63167	89 aa	Known RBP	12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	SEC23A	Q15436	765 aa		12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	E2F4	Q16254	413 aa		12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	CCDC122	Q5T0U0	273 aa		12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	CCDC148	Q8NFR7	591 aa		12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	FAM71B	Q8TC56	605 aa		12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	RASGRP4	Q8TDF6	673 aa		12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	EHD4	Q9H223	541 aa		12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	LIMA1	Q9UHB6	759 aa	Known RBP	12.52	□□□□□ -0.4
POLDIP3-205	ENST00000451060	EIF3CL	B5ME19	914 aa	Known RBP	12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	NKRF	O15226	690 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	SLC5A1	P13866	664 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	CYP27A1	Q02318	531 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	FUT2	Q10981	343 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	IRF2BP1	Q8IU81	584 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	EIF3C	Q99613	913 aa	Known RBP	12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	RNF26	Q9BY78	433 aa	Predicted RBP	12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	LACRT	Q9GZZ8	138 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	WDR17	Q8IZU2	1322 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060		A0A0G2JS52	829 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	MACROD2	A1Z1Q3	448 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	IFIT1B	Q5T764	474 aa	Known RBP	12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PDXDC2P	Q6P474	469 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PACS2	Q86VP3	889 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	DRC1	Q96MC2	740 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	SLC4A9	Q96Q91	983 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	AGPAT5	Q9NUQ2	364 aa		12.52	□□□□□ -0.41
POLDIP3-205	ENST00000451060	MYH6	P13533	1939 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	ITIH6	Q6UXX5	1313 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	ADAMTSL3	P82987	1691 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PDE2A	O00408	941 aa	Predicted RBP	12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	C2orf54	Q08AI8	447 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	TTC19	Q6DKK2	380 aa	Predicted RBP	12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	WDR59	Q6PJI9	974 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	TRAPPC11	Q7Z392	1133 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	IQUB	Q8NA54	791 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PSMB7	Q99436	277 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PLEKHG2	Q9H7P9	1386 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PDE8A	O60658	829 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PARP1	P09874	1014 aa	Known RBP	12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	XBP1	P17861	261 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	FECH	P22830	423 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	GGCX	P38435	758 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	USP14	P54578	494 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	CCDC51	Q96ER9	411 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	MTMR7	Q9Y216	660 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	UBR2	Q8IWV8	1755 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	CDHR2	Q9BYE9	1310 aa		12.51	□□□□□ -0.41
POLDIP3-205	ENST00000451060	RPN1	P04843	607 aa	Known RBP	12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	IVL	P07476	585 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	EZH2	Q15910	746 aa	Known RBP	12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	FAM47A	Q5JRC9	791 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	CAGE1	Q8TC20	777 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	ESR2	Q92731	530 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	POLD4	Q9HCU8	107 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	SMARCAL1	Q9NZC9	954 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	RWDD2A	Q9UIY3	292 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	HPCAL4	Q9UM19	191 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	MYH2	Q9UKX2	1941 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060		B4DLN1	442 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	STARD3NL	O95772	234 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	ERCC3	P19447	782 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	KIAA1328	Q86T90	577 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	SRBD1	Q8N5C6	995 aa	Known RBP	12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	RASSF8	Q8NHQ8	419 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	FERMT2	Q96AC1	680 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	GBP3	Q9H0R5	595 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	SAR1B	Q9Y6B6	198 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	ATP2C1	P98194	919 aa	Predicted RBP	12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	AFAP1L1	Q8TED9	768 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	IPO4	Q8TEX9	1081 aa	Known RBP	12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	TNFRSF25	Q93038	417 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	JAKMIP2	Q96AA8	810 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	NID2	Q14112	1375 aa		12.5	□□□□□ -0.41
POLDIP3-205	ENST00000451060	SEMA3E	O15041	775 aa		12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	MATR3	P43243	847 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	NOP2	P46087	812 aa	Known RBP	12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	NLRP5	P59047	1200 aa		12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	CATIP	Q7Z7H3	387 aa		12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	TMTC2	Q8N394	836 aa		12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.49	□□□□□ -0.41	1e-7	■■■□□ 18.8
POLDIP3-205	ENST00000451060	LUC7L2	Q9Y383	392 aa	Known RBP	12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	LRRC10B	A6NIK2	292 aa		12.49	□□□□□ -0.41
POLDIP3-205	ENST00000451060	PRPF6	O94906	941 aa	Known RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms