RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 MAFAQ8NHW3 353 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-211ENST00000449757 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
DDX39B-211ENST00000449757 CDX2Q99626 313 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-211ENST00000449757 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
DDX39B-211ENST00000449757 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
DDX39B-211ENST00000449757 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 PQBP1O60828 265 aaKnown RBP12.41□□□□□ -0.42
DDX39B-211ENST00000449757 SLC25A27O95847 323 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 PGK2P07205 417 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 VCANP13611 3396 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 KCTD2Q14681 263 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 ABRAQ8N0Z2 381 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 LENG1Q96BZ8 264 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-211ENST00000449757 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 RNPC3Q96LT9 517 aaKnown RBP12.41□□□□□ -0.42
DDX39B-211ENST00000449757 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.41□□□□□ -0.423e-10■□□□□ 10.7
DDX39B-211ENST00000449757 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 TMX2Q9Y320 296 aa12.41□□□□□ -0.42
DDX39B-211ENST00000449757 TRIM43BA6NCK2 446 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 HMMRO75330 724 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 PGK1P00558 417 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 IGHA2P01877 340 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 CLTBP09497 229 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 FOSL2P15408 326 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 CDK8P49336 464 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 TLE2Q04725 743 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 SNX17Q15036 470 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 RNF180Q86T96 592 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDX39B-211ENST00000449757 TRIM43Q96BQ3 446 aaPredicted RBP12.4□□□□□ -0.42
DDX39B-211ENST00000449757 BOLA2Q9H3K6 86 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 ATP8A2Q9NTI2 1148 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 FBXO28Q9NVF7 368 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 GREB1LQ9C091 1923 aaPredicted RBP12.4□□□□□ -0.42
DDX39B-211ENST00000449757 MYO9BQ13459 2157 aa12.4□□□□□ -0.42
DDX39B-211ENST00000449757 A0A1W2PQ45 241 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-211ENST00000449757 A0A1W2PQY0 241 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 EEF2P13639 858 aaKnown RBP12.39□□□□□ -0.43
DDX39B-211ENST00000449757 RAG1P15918 1043 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 ADD2P35612 726 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 FAM83BQ5T0W9 1011 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 SEMA6BQ9H3T3 888 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 PHF24Q9UPV7 400 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-211ENST00000449757 SLC4A4Q9Y6R1 1079 aa12.39□□□□□ -0.43
DDX39B-211ENST00000449757 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 USP17L21D6R901 530 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 AKR1A1P14550 325 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-211ENST00000449757 STAT3P40763 770 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
DDX39B-211ENST00000449757 C16orf86Q6ZW13 317 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 TINF2Q9BSI4 451 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 NRBP1Q9UHY1 535 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-211ENST00000449757 PPP1R9AQ9ULJ8 1098 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 TACC3Q9Y6A5 838 aa12.38□□□□□ -0.43
DDX39B-211ENST00000449757 PRUNE2Q8WUY3 3088 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 VWA5AO00534 786 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 CHGBP05060 677 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 COPB2P35606 906 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 FPGSQ05932 587 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
DDX39B-211ENST00000449757 SIAH1Q8IUQ4 282 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 TTYH1Q9H313 450 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-211ENST00000449757 KANSL2Q9H9L4 492 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 STARD7Q9NQZ5 370 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
DDX39B-211ENST00000449757 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
DDX39B-211ENST00000449757 MS4A1P11836 297 aa12.36□□□□□ -0.43
DDX39B-211ENST00000449757 ITGB8P26012 769 aa12.36□□□□□ -0.43
DDX39B-211ENST00000449757 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
DDX39B-211ENST00000449757 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
DDX39B-211ENST00000449757 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
DDX39B-211ENST00000449757 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-211ENST00000449757 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
DDX39B-211ENST00000449757 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-211ENST00000449757 GBF1Q92538 1859 aa12.36□□□□□ -0.43
DDX39B-211ENST00000449757 DCDC2CA8MYV0 355 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 ZNF865P0CJ78 1059 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-211ENST00000449757 EPHB4P54760 987 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
DDX39B-211ENST00000449757 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-211ENST00000449757 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms