RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SEC62Q99442 399 aaKnown RBP9.66□□□□□ -0.86
HCG18-238ENST00000449544 PSTPIP2Q9H939 334 aa9.66□□□□□ -0.86
HCG18-238ENST00000449544 FAM184BQ9ULE4 1060 aa9.66□□□□□ -0.86
HCG18-238ENST00000449544 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
HCG18-238ENST00000449544 PCP11498 1178 aaKnown RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 IDEP14735 1019 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 CALML4Q96GE6 196 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 NUP88Q99567 741 aaPredicted RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 DCP1AQ9NPI6 582 aaPredicted RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 RABEP1Q15276 862 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 STXBP2Q15833 593 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 ASPRV1Q53RT3 343 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 FAM117BQ6P1L5 589 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 TRMT44Q8IYL2 757 aaKnown RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 STARD7Q9NQZ5 370 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 RTEL1Q9NZ71 1219 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 TNKSO95271 1327 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 FAM205AQ6ZU69 1335 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 TBCAO75347 108 aaKnown RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 FKBP1CQ5VVH2 108 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 ELMSAN1Q6PJG2 1045 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 SYCP3Q8IZU3 236 aa9.65□□□□□ -0.86
HCG18-238ENST00000449544 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 SENP6Q9GZR1 1112 aaPredicted RBP9.65□□□□□ -0.86
HCG18-238ENST00000449544 KCPQ6ZWJ8 1503 aa9.65□□□□□ -0.87
HCG18-238ENST00000449544 FLT1P17948 1338 aa9.65□□□□□ -0.87
HCG18-238ENST00000449544 ZSCAN20P17040 1043 aaPredicted RBP9.65□□□□□ -0.87
HCG18-238ENST00000449544 HERVK_113P62684 666 aa9.65□□□□□ -0.87
HCG18-238ENST00000449544 HMGN5P82970 282 aaKnown RBP9.65□□□□□ -0.87
HCG18-238ENST00000449544 RNASELQ05823 741 aaKnown RBP9.65□□□□□ -0.87
HCG18-238ENST00000449544 GPR75-ASB3A0A0A6YYF3 556 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 IGSF3O75054 1194 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 FGAP02671 866 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 FLT3LGP49771 235 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 FMR1Q06787 632 aaKnown RBP eCLIP9.64□□□□□ -0.879e-6■■■■□ 20.6
HCG18-238ENST00000449544 FAM160B1Q5W0V3 765 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 UIMC1Q96RL1 719 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 FAM49AQ9H0Q0 323 aaPredicted RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 FAM13BQ9NYF5 915 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 NOP58Q9Y2X3 529 aaKnown RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 RABGAP1Q9Y3P9 1069 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 NFAT5O94916 1531 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 PRMT2P55345 433 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 NUCB1Q02818 461 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 LETM2Q2VYF4 491 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 GBP4Q96PP9 640 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 RMDN3Q96TC7 470 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 TMEM39AQ9NV64 488 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 YDJCA8MPS7 323 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 PQBP1O60828 265 aaKnown RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 AKR1B1P15121 316 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 PPM1FP49593 454 aaPredicted RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 SNAP25P60880 206 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 DHX32Q7L7V1 743 aaKnown RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 PCSK9Q8NBP7 692 aaKnown RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 NSUN6Q8TEA1 469 aaKnown RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
HCG18-238ENST00000449544 VCPKMTQ9H867 229 aa9.64□□□□□ -0.87
HCG18-238ENST00000449544 PITPNM2Q9BZ72 1349 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 MSCO60682 206 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 STXBP4Q6ZWJ1 553 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 MYL10Q9BUA6 226 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
HCG18-238ENST00000449544 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
HCG18-238ENST00000449544 ME1P48163 572 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 SAPCD2Q86UD0 394 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 NRBP2Q9NSY0 501 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 GLI3P10071 1580 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 SHPRHQ149N8 1683 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 GAS7O60861 476 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 ARID4AP29374 1257 aaPredicted RBP9.63□□□□□ -0.87
HCG18-238ENST00000449544 CCND2P30279 289 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 Q6ZUG5 572 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 OR6J1Q8NGC5 347 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 ATG4CQ96DT6 458 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 PUS7LQ9H0K6 701 aaKnown RBP9.63□□□□□ -0.87
HCG18-238ENST00000449544 MROH8Q9H579 483 aa9.63□□□□□ -0.87
HCG18-238ENST00000449544 RGPD8O14715 1765 aaPredicted RBP9.63□□□□□ -0.87
HCG18-238ENST00000449544 KNDC1Q76NI1 1749 aa9.62□□□□□ -0.87
HCG18-238ENST00000449544 OFD1O75665 1012 aa9.62□□□□□ -0.87
HCG18-238ENST00000449544 FKBP1AP62942 108 aaKnown RBP9.62□□□□□ -0.87
HCG18-238ENST00000449544 ODR4Q5SWX8 454 aa9.62□□□□□ -0.87
HCG18-238ENST00000449544 L3MBTL3Q96JM7 780 aaPredicted RBP9.62□□□□□ -0.87
HCG18-238ENST00000449544 TXNP10599 105 aaKnown RBP9.62□□□□□ -0.87
HCG18-238ENST00000449544 ERCC3P19447 782 aa9.62□□□□□ -0.87
HCG18-238ENST00000449544 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
HCG18-238ENST00000449544 CT47A1Q5JQC4 288 aaPredicted RBP9.62□□□□□ -0.87
HCG18-238ENST00000449544 ATG9AQ7Z3C6 839 aa9.62□□□□□ -0.87
HCG18-238ENST00000449544 REXO1Q8N1G1 1221 aaKnown RBP9.62□□□□□ -0.87
HCG18-238ENST00000449544 ASCC2Q9H1I8 757 aaPredicted RBP9.62□□□□□ -0.87
HCG18-238ENST00000449544 TLL2Q9Y6L7 1015 aa9.62□□□□□ -0.87
HCG18-238ENST00000449544 hCG_1642624A0A1W2PR95 340 aa9.62□□□□□ -0.87
HCG18-238ENST00000449544 RCSD1Q6JBY9 416 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms