RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 MCM9Q9NXL9 1143 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 NFU1Q9UMS0 254 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 AXIN2Q9Y2T1 843 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 EFCAB6Q5THR3 1501 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 MMP1P03956 469 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 NAPAP54920 295 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 NNTQ13423 1086 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 PACS2Q86VP3 889 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 DZIP1Q86YF9 867 aaKnown RBP13.82□□□□□ -0.2
UBE3B-204ENST00000449510 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 MGARPQ8TDB4 240 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 DCAF5Q96JK2 942 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 DPH5Q9H2P9 285 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 DUSP10Q9Y6W6 482 aa13.82□□□□□ -0.2
UBE3B-204ENST00000449510 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-204ENST00000449510 RPN1P04843 607 aaKnown RBP13.81□□□□□ -0.2
UBE3B-204ENST00000449510 ERCC5P28715 1186 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-204ENST00000449510 INF2Q27J81 1249 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 KRT71Q3SY84 523 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 MEX3CQ5U5Q3 659 aaKnown RBP13.81□□□□□ -0.2
UBE3B-204ENST00000449510 MMS22LQ6ZRQ5 1243 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 MLXIPQ9HAP2 919 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 SLC24A3Q9HC58 644 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
UBE3B-204ENST00000449510 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 TET3O43151 1660 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 GSTTP1A0A1W2PQM5 241 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 KIF4AO95239 1232 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 PTPREP23469 700 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 PPP1R7Q15435 360 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 FAM114A1Q8IWE2 563 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 ZCRB1Q8TBF4 217 aaKnown RBP13.81□□□□□ -0.2
UBE3B-204ENST00000449510 KANSL2Q9H9L4 492 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 PIH1D3Q9NQM4 214 aaKnown RBP13.81□□□□□ -0.2
UBE3B-204ENST00000449510 PP2D1A8MPX8 630 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 KRT14P02533 472 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 IFNAR2P48551 515 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 GUCY1A3Q02108 690 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 CCDC93Q567U6 631 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 NBPF14Q5TI25 921 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 LRRC31Q6UY01 552 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 BPIFA3Q9BQP9 254 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 UBN2Q6ZU65 1347 aa13.81□□□□□ -0.2
UBE3B-204ENST00000449510 ANKRD62A6NC57 917 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 ANTXR2P58335 489 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 TUBB2AQ13885 445 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 IFT20Q8IY31 132 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 MB21D2Q8IYB1 491 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-204ENST00000449510 TUBB2BQ9BVA1 445 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 NEDD4P46934 1319 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 USP17L12C9JPN9 530 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 USP17L21D6R901 530 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 MCAMP43121 646 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 LRRC41Q15345 812 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 KIRREL3Q8IZU9 778 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 MARCH10Q8NA82 808 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-204ENST00000449510 SPATA5Q8NB90 893 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 L1RE1Q9UN81 338 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 PACSIN2Q9UNF0 486 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-204ENST00000449510 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 KCNK3O14649 394 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 BMP15O95972 392 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 CCDC172P0C7W6 258 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 AMPD3Q01432 767 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 MCTP2Q6DN12 878 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 NFRKBQ6P4R8 1299 aa13.8□□□□□ -0.2
UBE3B-204ENST00000449510 MYO1FO00160 1098 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 CCNT1O60563 726 aaKnown RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 HEXIM1O94992 359 aaKnown RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 KIF5BP33176 963 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 SEC24CP53992 1094 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 EIF6P56537 245 aaKnown RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 DCAF17Q5H9S7 520 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 MICAL1Q8TDZ2 1067 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 MRRFQ96E11 262 aaKnown RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 ANKZF1Q9H8Y5 726 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 AATFQ9NY61 560 aaKnown RBP eCLIP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 PLEKHA8P1O95397 391 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 CTNNA1P35221 906 aaKnown RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 TNNI2P48788 182 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 ADCY1Q08828 1119 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 HPS3Q969F9 1004 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 NOX5Q96PH1 765 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 KCNK9Q9NPC2 374 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 MPHOSPH10O00566 681 aaKnown RBP13.79□□□□□ -0.2
UBE3B-204ENST00000449510 KIAA0753Q2KHM9 967 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 ARHGEF25Q86VW2 580 aa13.79□□□□□ -0.2
UBE3B-204ENST00000449510 TRIML1Q8N9V2 468 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms