RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SYT1P21579 422 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 SLC1A4P43007 532 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 NUCB2P80303 420 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 PRKG1Q13976 671 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 FAM184AQ8NB25 1140 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 ZNF280CQ8ND82 737 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 DDX11Q96FC9 970 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 CSADQ9Y600 493 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 USP17L10C9JJH3 530 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 CYTH3O43739 400 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 SLC35G1Q2M3R5 365 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 CCDC84Q86UT8 332 aaPredicted RBP22.36■■□□□ 1.17
RPS28-202ENST00000449223 CMTR1Q8N1G2 835 aaKnown RBP22.36■■□□□ 1.17
RPS28-202ENST00000449223 SLC26A6Q9BXS9 759 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 RIOX1Q9H6W3 641 aa22.36■■□□□ 1.17
RPS28-202ENST00000449223 GPBP1L1Q9HC44 474 aaPredicted RBP22.36■■□□□ 1.17
RPS28-202ENST00000449223 USP14P54578 494 aa22.35■■□□□ 1.17
RPS28-202ENST00000449223 LARP1BQ659C4 914 aaKnown RBP22.35■■□□□ 1.17
RPS28-202ENST00000449223 BTNL9Q6UXG8 535 aa22.35■■□□□ 1.17
RPS28-202ENST00000449223 WASF1Q92558 559 aa22.35■■□□□ 1.17
RPS28-202ENST00000449223 C12orf42Q96LP6 360 aa22.35■■□□□ 1.17
RPS28-202ENST00000449223 AFG3L2Q9Y4W6 797 aa22.35■■□□□ 1.17
RPS28-202ENST00000449223 BAZ2BQ9UIF8 2168 aaKnown RBP22.34■■□□□ 1.17
RPS28-202ENST00000449223 STX6O43752 255 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 PLA2G6O60733 806 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 DTNBO60941 627 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 BRD1O95696 1058 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 GOLGA8HP0CJ92 632 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 BMP3P12645 472 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 BACE1P56817 501 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 PKN1Q16512 942 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 KIAA1755Q5JYT7 1200 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 MTMR7Q9Y216 660 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 ZHX2Q9Y6X8 837 aa22.34■■□□□ 1.17
RPS28-202ENST00000449223 C19orf81C9J6K1 198 aa22.33■■□□□ 1.17
RPS28-202ENST00000449223 PPATQ06203 517 aa22.33■■□□□ 1.17
RPS28-202ENST00000449223 ERO1BQ86YB8 467 aa22.33■■□□□ 1.17
RPS28-202ENST00000449223 CCDC82Q8N4S0 544 aa22.33■■□□□ 1.17
RPS28-202ENST00000449223 RBM46Q8TBY0 533 aaKnown RBP22.33■■□□□ 1.17
RPS28-202ENST00000449223 FEZ1Q99689 392 aa22.33■■□□□ 1.17
RPS28-202ENST00000449223 FRMPD2Q68DX3 1309 aaPredicted RBP22.33■■□□□ 1.16
RPS28-202ENST00000449223 SPDYE5A6NIY4 337 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 KIF3CO14782 793 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 PPFIA3O75145 1194 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 SPP2Q13103 211 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 PKP1Q13835 747 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 CCDC96Q2M329 555 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 SH3D19Q5HYK7 790 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 KCTD1Q719H9 257 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 FAM177A1Q8N128 213 aaPredicted RBP22.32■■□□□ 1.16
RPS28-202ENST00000449223 MTMR8Q96EF0 704 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 ZDHHC9Q9Y397 364 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 V9GY48 417 aaPredicted RBP22.32■■□□□ 1.16
RPS28-202ENST00000449223 LOC285556D6RIA3 1793 aa22.32■■□□□ 1.16
RPS28-202ENST00000449223 WDR33Q9C0J8 1336 aaKnown RBP22.32■■□□□ 1.16
RPS28-202ENST00000449223 WDR46O15213 610 aaKnown RBP22.31■■□□□ 1.16
RPS28-202ENST00000449223 AKAP17AQ02040 695 aaKnown RBP22.31■■□□□ 1.16
RPS28-202ENST00000449223 FMR1Q06787 632 aaKnown RBP eCLIP22.31■■□□□ 1.166e-7■□□□□ 10.3
RPS28-202ENST00000449223 MTMR2Q13614 643 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 TTLL12Q14166 644 aaPredicted RBP22.31■■□□□ 1.16
RPS28-202ENST00000449223 PFKFB3Q16875 520 aaPredicted RBP22.31■■□□□ 1.16
RPS28-202ENST00000449223 MOB2Q70IA6 237 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 FBXO18Q8NFZ0 1043 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 GBA2Q9HCG7 927 aaPredicted RBP22.31■■□□□ 1.16
RPS28-202ENST00000449223 PARP14Q460N5 1801 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 ALG1Q9BT22 464 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 GPCPD1Q9NPB8 672 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 EMILIN3Q9NT22 766 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 MTMR6Q9Y217 621 aa22.31■■□□□ 1.16
RPS28-202ENST00000449223 SCG2P13521 617 aa22.3■■□□□ 1.16
RPS28-202ENST00000449223 TTBK2Q6IQ55 1244 aa22.3■■□□□ 1.16
RPS28-202ENST00000449223 SPICE1Q8N0Z3 855 aa22.3■■□□□ 1.16
RPS28-202ENST00000449223 CLMNQ96JQ2 1002 aa22.3■■□□□ 1.16
RPS28-202ENST00000449223 C8orf76Q96K31 380 aa22.3■■□□□ 1.16
RPS28-202ENST00000449223 KCNH4Q9UQ05 1017 aa22.3■■□□□ 1.16
RPS28-202ENST00000449223 PASKQ96RG2 1323 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 UBE2Q2LH0YL09 131 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 hCG_1984214I3L0E3 225 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 CELF2O95319 508 aaKnown RBP22.29■■□□□ 1.16
RPS28-202ENST00000449223 PPIL2Q13356 520 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 FAM83BQ5T0W9 1011 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 ADGRF4Q8IZF3 695 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 ZNF713Q8N859 430 aaPredicted RBP22.29■■□□□ 1.16
RPS28-202ENST00000449223 RRP36Q96EU6 259 aaKnown RBP22.29■■□□□ 1.16
RPS28-202ENST00000449223 NUP88Q99567 741 aaPredicted RBP22.29■■□□□ 1.16
RPS28-202ENST00000449223 UBA5Q9GZZ9 404 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 JMJD4Q9H9V9 463 aa22.29■■□□□ 1.16
RPS28-202ENST00000449223 TRIM75PA6NK02 468 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 CXCL11O14625 94 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 RAD21O60216 631 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 ZSCAN22P10073 491 aaPredicted RBP22.28■■□□□ 1.16
RPS28-202ENST00000449223 VCAM1P19320 739 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 STAT2P52630 851 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 ZYXQ15942 572 aaKnown RBP22.28■■□□□ 1.16
RPS28-202ENST00000449223 CST9Q5W186 159 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 FAM160B2Q86V87 743 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 C2orf69Q8N8R5 385 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 CPVLQ9H3G5 476 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 ELP3Q9H9T3 547 aa22.28■■□□□ 1.16
RPS28-202ENST00000449223 SH3GLB2Q9NR46 395 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms