RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SLC1A4P43007 532 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 GNAQP50148 359 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
SHMT2-203ENST00000449049 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 GPATCH4Q5T3I0 446 aaKnown RBP16.36■□□□□ 0.21
SHMT2-203ENST00000449049 SMARCC2Q8TAQ2 1214 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 LOC285556D6RIA3 1793 aa16.36■□□□□ 0.21
SHMT2-203ENST00000449049 CDKL5O76039 1030 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 PLEKHA8P1O95397 391 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 IFNAR1P17181 557 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 FUT2Q10981 343 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 CPLX2Q6PUV4 134 aaKnown RBP16.35■□□□□ 0.21
SHMT2-203ENST00000449049 SLC10A4Q96EP9 437 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 LZTS2Q9BRK4 669 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 DAXXQ9UER7 740 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-203ENST00000449049 KCNH4Q9UQ05 1017 aa16.35■□□□□ 0.21
SHMT2-203ENST00000449049 FRMPD2Q68DX3 1309 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-203ENST00000449049 RAD21O60216 631 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 HSP90AA1P07900 732 aaKnown RBP16.34■□□□□ 0.21
SHMT2-203ENST00000449049 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 BMP3P12645 472 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 CCDC96Q2M329 555 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 CNTNAP5Q8WYK1 1306 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 KLRF2D3W0D1 207 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 CXCL11O14625 94 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 IRF6O14896 467 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
SHMT2-203ENST00000449049 SMARCA1P28370 1054 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 GJA5P36382 358 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
SHMT2-203ENST00000449049 SRBD1Q8N5C6 995 aaKnown RBP16.34■□□□□ 0.21
SHMT2-203ENST00000449049 JAK2O60674 1132 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 HUNKP57058 714 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 KCTD1Q719H9 257 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 SAPCD2Q86UD0 394 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 CMTR1Q8N1G2 835 aaKnown RBP16.33■□□□□ 0.21
SHMT2-203ENST00000449049 WNK4Q96J92 1243 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 NUP88Q99567 741 aaPredicted RBP16.33■□□□□ 0.21
SHMT2-203ENST00000449049 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 GPCPD1Q9NPB8 672 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.21
SHMT2-203ENST00000449049 TLL2Q9Y6L7 1015 aa16.33■□□□□ 0.21
SHMT2-203ENST00000449049 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 A0A0G2JLL6 359 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-203ENST00000449049 VCAM1P19320 739 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 HMGCS2P54868 508 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 HMGN5P82970 282 aaKnown RBP16.33■□□□□ 0.2
SHMT2-203ENST00000449049 DGKZQ13574 1117 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 PRRT2Q7Z6L0 340 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-203ENST00000449049 SPRYD3Q8NCJ5 442 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 SMC3Q9UQE7 1217 aa16.33■□□□□ 0.2
SHMT2-203ENST00000449049 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-203ENST00000449049 TTBK2Q6IQ55 1244 aa16.32■□□□□ 0.2
SHMT2-203ENST00000449049 BTNL9Q6UXG8 535 aa16.32■□□□□ 0.2
SHMT2-203ENST00000449049 PHKBQ93100 1093 aa16.32■□□□□ 0.2
SHMT2-203ENST00000449049 RNF26Q9BY78 433 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-203ENST00000449049 TMEM88BA6NKF7 163 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 CYTH3O43739 400 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 PLA2G6O60733 806 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 FDPSP14324 419 aaKnown RBP16.31■□□□□ 0.2
SHMT2-203ENST00000449049 RIOX1Q9H6W3 641 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 TMOD4Q9NZQ9 345 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
SHMT2-203ENST00000449049 DTNBO60941 627 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 ZBTB48P10074 688 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-203ENST00000449049 GJB2P29033 226 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 SSRP1Q08945 709 aaKnown RBP16.31■□□□□ 0.2
SHMT2-203ENST00000449049 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-203ENST00000449049 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 PARP14Q460N5 1801 aa16.31■□□□□ 0.2
SHMT2-203ENST00000449049 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 SPRYD7Q5W111 196 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 TRIM22Q8IYM9 498 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 DDX11Q96FC9 970 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
SHMT2-203ENST00000449049 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 STAT2P52630 851 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 MOGSQ13724 837 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 RGMBQ6NW40 437 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 FAM160B2Q86V87 743 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 RASAL3Q86YV0 1011 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 HHIPL1Q96JK4 782 aa16.3■□□□□ 0.2
SHMT2-203ENST00000449049 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
SHMT2-203ENST00000449049 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
SHMT2-203ENST00000449049 ORC3Q9UBD5 711 aaPredicted RBP16.3■□□□□ 0.2
SHMT2-203ENST00000449049 ISY1Q9ULR0 285 aaKnown RBP16.3■□□□□ 0.2
SHMT2-203ENST00000449049 DDIT3P35638 169 aa16.29■□□□□ 0.2
SHMT2-203ENST00000449049 SLC16A2P36021 539 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms