RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 GREB1LQ9C091 1923 aaPredicted RBP13.87□□□□□ -0.19
RCL1-208ENST00000448872 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 TESPA1A2RU30 521 aaPredicted RBP13.87□□□□□ -0.19
RCL1-208ENST00000448872 MANSC4A6NHS7 340 aaPredicted RBP13.87□□□□□ -0.19
RCL1-208ENST00000448872 SLC1A4P43007 532 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 NOGQ13253 232 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 CCDC96Q2M329 555 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 TTBK2Q6IQ55 1244 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 LPAR1Q92633 364 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 CPVLQ9H3G5 476 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 GPCPD1Q9NPB8 672 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
RCL1-208ENST00000448872 GOLGA8BA8MQT2 603 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 LARGE1O95461 756 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 FASTKD5Q7L8L6 764 aaKnown RBP13.86□□□□□ -0.19
RCL1-208ENST00000448872 TMTC2Q8N394 836 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 STAG2Q8N3U4 1231 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 PROCA1Q8NCQ7 364 aaPredicted RBP13.86□□□□□ -0.19
RCL1-208ENST00000448872 TANGO6Q9C0B7 1094 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
RCL1-208ENST00000448872 FBXO28Q9NVF7 368 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 AGTPBP1Q9UPW5 1226 aa13.86□□□□□ -0.19
RCL1-208ENST00000448872 PDHXO00330 501 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
RCL1-208ENST00000448872 ZBTB43O43298 467 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 DTNBO60941 627 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 DDAH1O94760 285 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 BMP3P12645 472 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 PDIA3P30101 505 aaKnown RBP13.85□□□□□ -0.19
RCL1-208ENST00000448872 SLC16A2P36021 539 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 EVCP57679 992 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 STK3Q13188 491 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 GRM4Q14833 912 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 DNAJC5GQ8N7S2 189 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 DCAF4Q8WV16 495 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 MAD2L2Q9UI95 211 aa13.85□□□□□ -0.19
RCL1-208ENST00000448872 TMEM232C9JQI7 657 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 PEX10O60683 326 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
RCL1-208ENST00000448872 CYP2C8P10632 490 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 TM4SF4P48230 202 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 SNAP25P60880 206 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
RCL1-208ENST00000448872 ME3Q16798 604 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 SLC35G1Q2M3R5 365 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 POTEEQ6S8J3 1075 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
RCL1-208ENST00000448872 CMTR1Q8N1G2 835 aaKnown RBP13.84□□□□□ -0.19
RCL1-208ENST00000448872 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
RCL1-208ENST00000448872 FAM217BQ9NTX9 383 aaPredicted RBP13.84□□□□□ -0.19
RCL1-208ENST00000448872 PCNTO95613 3336 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 PALM3A6NDB9 673 aaPredicted RBP13.83□□□□□ -0.2
RCL1-208ENST00000448872 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 PPFIA3O75145 1194 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 PLEKHA8P1O95397 391 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 CDC27P30260 824 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 SREBF2Q12772 1141 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 ANKRD1Q15327 319 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 NECAB1Q8N987 351 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 FANCBQ8NB91 859 aa13.83□□□□□ -0.2
RCL1-208ENST00000448872 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.2
RCL1-208ENST00000448872 ASCC2Q9H1I8 757 aaPredicted RBP13.83□□□□□ -0.2
RCL1-208ENST00000448872 ST18O60284 1047 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 FLOT1O75955 427 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 HOXA7P31268 230 aaPredicted RBP13.82□□□□□ -0.2
RCL1-208ENST00000448872 ADD1P35611 737 aaKnown RBP13.82□□□□□ -0.2
RCL1-208ENST00000448872 MAP2K2P36507 400 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
RCL1-208ENST00000448872 IKQ13123 557 aaPredicted RBP13.82□□□□□ -0.2
RCL1-208ENST00000448872 CCDC82Q8N4S0 544 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
RCL1-208ENST00000448872 KIFC2Q96AC6 838 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 LIMCH1Q9UPQ0 1083 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 PHIPQ8WWQ0 1821 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 ATAD5Q96QE3 1844 aa13.82□□□□□ -0.2
RCL1-208ENST00000448872 KLRF2D3W0D1 207 aa13.81□□□□□ -0.2
RCL1-208ENST00000448872 CALM1P0DP23 149 aa13.81□□□□□ -0.2
RCL1-208ENST00000448872 CALM2P0DP24 149 aa13.81□□□□□ -0.2
RCL1-208ENST00000448872 CALM3P0DP25 149 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms