RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 SLURP2P0DP57 97 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 PDHBP11177 359 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 CLEC10AQ8IUN9 316 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 CCDC17Q96LX7 622 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 TDRD3Q9H7E2 651 aaKnown RBP20.31■□□□□ 0.84
LMNA-208ENST00000448611 PI4KBQ9UBF8 816 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 USP25Q9UHP3 1055 aa20.31■□□□□ 0.84
LMNA-208ENST00000448611 NOL7Q9UMY1 257 aaKnown RBP20.31■□□□□ 0.84
LMNA-208ENST00000448611 STXBP3O00186 592 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 WNT7AO00755 349 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 CAVIN2O95810 425 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 VIL1P09327 827 aaKnown RBP20.3■□□□□ 0.84
LMNA-208ENST00000448611 SNHG28P0DPA3 235 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 SYKP43405 635 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 GRIN1Q05586 938 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 DALRD3Q5D0E6 543 aaKnown RBP20.3■□□□□ 0.84
LMNA-208ENST00000448611 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 FAM177A1Q8N128 213 aaPredicted RBP20.3■□□□□ 0.84
LMNA-208ENST00000448611 ZNF579Q8NAF0 562 aaKnown RBP20.3■□□□□ 0.84
LMNA-208ENST00000448611 PRMT6Q96LA8 375 aaPredicted RBP20.3■□□□□ 0.84
LMNA-208ENST00000448611 GMLQ99445 158 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 CPVLQ9H3G5 476 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 CBX8Q9HC52 389 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 BARHL2Q9NY43 387 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 PCDHA4Q9UN74 947 aa20.3■□□□□ 0.84
LMNA-208ENST00000448611 SRPRBQ9Y5M8 271 aaKnown RBP20.3■□□□□ 0.84
LMNA-208ENST00000448611 STX1AQ16623 288 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 BLIDQ8IZY5 108 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 LRRC47Q8N1G4 583 aaKnown RBP20.29■□□□□ 0.84
LMNA-208ENST00000448611 DNAJC25Q9H1X3 360 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 CLIP2Q9UDT6 1046 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 M0R2N6 131 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 PSMD14O00487 310 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 ENTPD3O75355 529 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 RAD17O75943 681 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 TRAPPC10P48553 1259 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
LMNA-208ENST00000448611 PIK3AP1Q6ZUJ8 805 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 LUZP1Q86V48 1076 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 DAGLBQ8NCG7 672 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 ERCC4Q92889 916 aaPredicted RBP20.29■□□□□ 0.84
LMNA-208ENST00000448611 KIAA1468Q9P260 1216 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 BCS1LQ9Y276 419 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 ATRNL1Q5VV63 1379 aa20.29■□□□□ 0.84
LMNA-208ENST00000448611 BMP15O95972 392 aa20.28■□□□□ 0.84
LMNA-208ENST00000448611 ZNF165P49910 485 aa20.28■□□□□ 0.84
LMNA-208ENST00000448611 ASPRV1Q53RT3 343 aa20.28■□□□□ 0.84
LMNA-208ENST00000448611 TTC38Q5R3I4 469 aa20.28■□□□□ 0.84
LMNA-208ENST00000448611 HEATR3Q7Z4Q2 680 aa20.28■□□□□ 0.84
LMNA-208ENST00000448611 METTL16Q86W50 562 aaKnown RBP20.28■□□□□ 0.84
LMNA-208ENST00000448611 CCDC148Q8NFR7 591 aa20.28■□□□□ 0.84
LMNA-208ENST00000448611 KCNH3Q9ULD8 1083 aa20.28■□□□□ 0.84
LMNA-208ENST00000448611 COL2A1P02458 1487 aaPredicted RBP20.28■□□□□ 0.84
LMNA-208ENST00000448611 BRCA1P38398 1863 aaKnown RBP20.28■□□□□ 0.84
LMNA-208ENST00000448611 GALNT17Q6IS24 598 aa20.27■□□□□ 0.84
LMNA-208ENST00000448611 TATDN1Q6P1N9 297 aa20.27■□□□□ 0.84
LMNA-208ENST00000448611 FOXP4Q8IVH2 680 aaPredicted RBP20.27■□□□□ 0.84
LMNA-208ENST00000448611 RRP36Q96EU6 259 aaKnown RBP20.27■□□□□ 0.84
LMNA-208ENST00000448611 RIOX1Q9H6W3 641 aa20.27■□□□□ 0.84
LMNA-208ENST00000448611 FAM196BA6NMK8 535 aa20.27■□□□□ 0.84
LMNA-208ENST00000448611 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
LMNA-208ENST00000448611 AP5Z1O43299 807 aa20.27■□□□□ 0.84
LMNA-208ENST00000448611 SPECC1Q5M775 1068 aa20.27■□□□□ 0.84
LMNA-208ENST00000448611 C11orf57Q6ZUT1 292 aaPredicted RBP20.27■□□□□ 0.84
LMNA-208ENST00000448611 ZSCAN29Q8IWY8 852 aaPredicted RBP20.27■□□□□ 0.84
LMNA-208ENST00000448611 FRMPD2Q68DX3 1309 aaPredicted RBP20.26■□□□□ 0.83
LMNA-208ENST00000448611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.26■□□□□ 0.83
LMNA-208ENST00000448611 SPDYE2BA6NHP3 402 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 ADCY5O95622 1261 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 SPDYE6P0CI01 402 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 HS1BP3Q53T59 392 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 PPP4R3BQ5MIZ7 849 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 FAM43AQ8N2R8 423 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 ZNRF3Q9ULT6 936 aa20.26■□□□□ 0.83
LMNA-208ENST00000448611 ZNF174Q15697 407 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 CERKLQ49MI3 558 aaPredicted RBP20.25■□□□□ 0.83
LMNA-208ENST00000448611 PIGSQ96S52 555 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 ZMYND12Q9H0C1 365 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 CSRNP2Q9H175 543 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 ANO10Q9NW15 660 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 FAM13BQ9NYF5 915 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 PCDHA6Q9UN73 950 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 PCDHA8Q9Y5H6 950 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 A0A087WWV3 80 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 ATP2C1P98194 919 aaPredicted RBP20.25■□□□□ 0.83
LMNA-208ENST00000448611 ZNF543Q08ER8 600 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 KRBA2Q6ZNG9 492 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
LMNA-208ENST00000448611 IQCB1Q15051 598 aa20.24■□□□□ 0.83
LMNA-208ENST00000448611 LONRF3Q496Y0 759 aa20.24■□□□□ 0.83
LMNA-208ENST00000448611 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
LMNA-208ENST00000448611 ELOA2Q8IYF1 753 aaPredicted RBP20.24■□□□□ 0.83
LMNA-208ENST00000448611 FERMT2Q96AC1 680 aa20.24■□□□□ 0.83
LMNA-208ENST00000448611 SEC63Q9UGP8 760 aaKnown RBP20.24■□□□□ 0.83
LMNA-208ENST00000448611 HDAC9Q9UKV0 1011 aa20.24■□□□□ 0.83
LMNA-208ENST00000448611 ZBTB12Q9Y330 459 aaPredicted RBP20.24■□□□□ 0.83
LMNA-208ENST00000448611 SHROOM1Q2M3G4 852 aaPredicted RBP20.23■□□□□ 0.83
LMNA-208ENST00000448611 RASGRP4Q8TDF6 673 aa20.23■□□□□ 0.83
LMNA-208ENST00000448611 CCDC12Q8WUD4 166 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms