RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.81■■■□□ 2.2
RFFL-206ENST00000447669 ZNF543Q08ER8 600 aa28.8■■■□□ 2.2
RFFL-206ENST00000447669 USP50Q70EL3 339 aaPredicted RBP28.8■■■□□ 2.2
RFFL-206ENST00000447669 KRT26Q7Z3Y9 468 aa28.8■■■□□ 2.2
RFFL-206ENST00000447669 GPKOWQ92917 476 aaPredicted RBP eCLIP28.8■■■□□ 2.2
RFFL-206ENST00000447669 PITPNM2Q9BZ72 1349 aa28.8■■■□□ 2.2
RFFL-206ENST00000447669 SULF1Q8IWU6 871 aa28.79■■■□□ 2.2
RFFL-206ENST00000447669 GNAQP50148 359 aa28.79■■■□□ 2.2
RFFL-206ENST00000447669 USP48Q86UV5 1035 aa28.79■■■□□ 2.2
RFFL-206ENST00000447669 HOMER1Q86YM7 354 aa28.79■■■□□ 2.2
RFFL-206ENST00000447669 WRNIP1Q96S55 665 aa28.79■■■□□ 2.2
RFFL-206ENST00000447669 NDUFB10O96000 172 aa28.78■■■□□ 2.2
RFFL-206ENST00000447669 NCLP19338 710 aaKnown RBP28.78■■■□□ 2.2
RFFL-206ENST00000447669 WASF1Q92558 559 aa28.78■■■□□ 2.2
RFFL-206ENST00000447669 ZNF341Q9BYN7 854 aa28.78■■■□□ 2.2
RFFL-206ENST00000447669 TFIP11Q9UBB9 837 aaKnown RBP28.78■■■□□ 2.2
RFFL-206ENST00000447669 ASNSP08243 561 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 SLC1A4P43007 532 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 DGKZQ13574 1117 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 PPP4R3BQ5MIZ7 849 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 DCAF15Q66K64 600 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 SCN4AP35499 1836 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 ASPRV1Q53RT3 343 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 PPP2R3BQ9Y5P8 575 aa28.77■■■□□ 2.2
RFFL-206ENST00000447669 ADAMTS3O15072 1205 aa28.76■■■□□ 2.19
RFFL-206ENST00000447669 SCG2P13521 617 aa28.76■■■□□ 2.19
RFFL-206ENST00000447669 PDIA4P13667 645 aaKnown RBP28.76■■■□□ 2.19
RFFL-206ENST00000447669 KIF23Q02241 960 aaPredicted RBP28.76■■■□□ 2.19
RFFL-206ENST00000447669 TRIM29Q14134 588 aa28.76■■■□□ 2.19
RFFL-206ENST00000447669 PIGSQ96S52 555 aa28.76■■■□□ 2.19
RFFL-206ENST00000447669 ARHGEF10LQ9HCE6 1279 aa28.76■■■□□ 2.19
RFFL-206ENST00000447669 CTNND1O60716 968 aaKnown RBP28.76■■■□□ 2.19
RFFL-206ENST00000447669 PFKFB3Q16875 520 aaPredicted RBP28.76■■■□□ 2.19
RFFL-206ENST00000447669 TPRNQ4KMQ1 711 aa28.76■■■□□ 2.19
RFFL-206ENST00000447669 FTOQ9C0B1 505 aaKnown RBP eCLIP28.76■■■□□ 2.19
RFFL-206ENST00000447669 TMX2Q9Y320 296 aa28.76■■■□□ 2.19
RFFL-206ENST00000447669 OXER1Q8TDS5 423 aa28.75■■■□□ 2.19
RFFL-206ENST00000447669 SPZ1Q9BXG8 430 aa28.75■■■□□ 2.19
RFFL-206ENST00000447669 ZNF112Q9UJU3 913 aa28.75■■■□□ 2.19
RFFL-206ENST00000447669 IQCA1LA6NCM1 817 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 BTBD18B2RXH4 712 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 FIBPO43427 364 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 PRPF40AO75400 957 aaKnown RBP28.74■■■□□ 2.19
RFFL-206ENST00000447669 TYW1BQ6NUM6 668 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 GMCL1P1Q8NEA9 526 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 KLRG1Q96E93 195 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 LZTS2Q9BRK4 669 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 RRAGCQ9HB90 399 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 WDR90Q96KV7 1748 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 USP2O75604 605 aaPredicted RBP28.74■■■□□ 2.19
RFFL-206ENST00000447669 MMP1P03956 469 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 ADGRF4Q8IZF3 695 aa28.74■■■□□ 2.19
RFFL-206ENST00000447669 CEBPZQ03701 1054 aaKnown RBP28.73■■■□□ 2.19
RFFL-206ENST00000447669 FMR1Q06787 632 aaKnown RBP eCLIP28.73■■■□□ 2.19
RFFL-206ENST00000447669 NR5A1Q13285 461 aa28.73■■■□□ 2.19
RFFL-206ENST00000447669 SUPT20HL1Q3ZLR7 823 aa28.73■■■□□ 2.19
RFFL-206ENST00000447669 ZSCAN16Q9H4T2 348 aaPredicted RBP28.73■■■□□ 2.19
RFFL-206ENST00000447669 RIOX1Q9H6W3 641 aa28.73■■■□□ 2.19
RFFL-206ENST00000447669 ATP6V1DQ9Y5K8 247 aa28.73■■■□□ 2.19
RFFL-206ENST00000447669 USP17L10C9JJH3 530 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 SNAP25P60880 206 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 WWC2Q6AWC2 1192 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 ZNF526Q8TF50 670 aaPredicted RBP28.72■■■□□ 2.19
RFFL-206ENST00000447669 DCAF4Q8WV16 495 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 JMJD4Q9H9V9 463 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 CLEC11AQ9Y240 323 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 MYH15Q9Y2K3 1946 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 MOB2Q70IA6 237 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 HEATR3Q7Z4Q2 680 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 DOCK1Q14185 1865 aa28.72■■■□□ 2.19
RFFL-206ENST00000447669 GPATCH4Q5T3I0 446 aaKnown RBP28.71■■■□□ 2.19
RFFL-206ENST00000447669 DIS3L2Q8IYB7 885 aaKnown RBP28.71■■■□□ 2.19
RFFL-206ENST00000447669 PHF20Q9BVI0 1012 aa28.71■■■□□ 2.19
RFFL-206ENST00000447669 LMBRD1Q9NUN5 540 aa28.71■■■□□ 2.19
RFFL-206ENST00000447669 TMEM232C9JQI7 657 aa28.7■■■□□ 2.19
RFFL-206ENST00000447669 FAM83BQ5T0W9 1011 aa28.7■■■□□ 2.19
RFFL-206ENST00000447669 SCYL3Q8IZE3 742 aa28.7■■■□□ 2.19
RFFL-206ENST00000447669 ZC3H15Q8WU90 426 aaKnown RBP28.7■■■□□ 2.19
RFFL-206ENST00000447669 RRP36Q96EU6 259 aaKnown RBP28.7■■■□□ 2.19
RFFL-206ENST00000447669 CDCA5Q96FF9 252 aa28.7■■■□□ 2.19
RFFL-206ENST00000447669 GNL2Q13823 731 aaKnown RBP28.7■■■□□ 2.18
RFFL-206ENST00000447669 NPY5RQ15761 445 aa28.7■■■□□ 2.18
RFFL-206ENST00000447669 MAP1SQ66K74 1059 aaPredicted RBP28.7■■■□□ 2.18
RFFL-206ENST00000447669 HOOK2Q96ED9 719 aa28.7■■■□□ 2.18
RFFL-206ENST00000447669 GMCL1Q96IK5 515 aa28.7■■■□□ 2.18
RFFL-206ENST00000447669 FEZ1Q99689 392 aa28.7■■■□□ 2.18
RFFL-206ENST00000447669 BMP3P12645 472 aa28.69■■■□□ 2.18
RFFL-206ENST00000447669 NOM1Q5C9Z4 860 aaKnown RBP28.69■■■□□ 2.18
RFFL-206ENST00000447669 PTPRAP18433 802 aa28.69■■■□□ 2.18
RFFL-206ENST00000447669 VCPKMTQ9H867 229 aa28.69■■■□□ 2.18
RFFL-206ENST00000447669 GOPCQ9HD26 462 aa28.69■■■□□ 2.18
RFFL-206ENST00000447669 DDX11L8A8MPP1 907 aa28.68■■■□□ 2.18
RFFL-206ENST00000447669 GADD45BO75293 160 aaPredicted RBP28.68■■■□□ 2.18
RFFL-206ENST00000447669 IKQ13123 557 aaPredicted RBP28.68■■■□□ 2.18
RFFL-206ENST00000447669 SAMD1Q6SPF0 538 aaPredicted RBP28.68■■■□□ 2.18
RFFL-206ENST00000447669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.68■■■□□ 2.18
RFFL-206ENST00000447669 FAM205CA6NFA0 338 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 STXBP3O00186 592 aa28.67■■■□□ 2.18
RFFL-206ENST00000447669 PPP1R11O60927 126 aaPredicted RBP28.67■■■□□ 2.18
RFFL-206ENST00000447669 SMARCA1P28370 1054 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms