RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TP53P04637 393 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 SSTR4P31391 388 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 CHMP4BP1P59074 171 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 PRKCQQ04759 706 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 NMIQ13287 307 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 ZMYM1Q5SVZ6 1142 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 SOGA3Q5TF21 947 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 CDKAL1Q5VV42 579 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 BCL7CQ8WUZ0 217 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 HDAC8Q9BY41 377 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 GP6Q9HCN6 339 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 PPP1R1BQ9UD71 204 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 VAV3Q9UKW4 847 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 ZNF451Q9Y4E5 1061 aa6.73□□□□□ -1.33
HMGB1P48-201ENST00000446155 SIGLEC6O43699 453 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 ADAMTS4O75173 837 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 EPHX1P07099 455 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 CD247P20963 164 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 CDK11BP21127 795 aaKnown RBP6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 LRP8Q14114 963 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 TSPYL5Q86VY4 417 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 ENOX1Q8TC92 643 aaKnown RBP6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 SYTL5Q8TDW5 730 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 HRASLS5Q96KN8 279 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 FAM86C1Q9NVL1 165 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 SIRPGQ9P1W8 387 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 CDK11AQ9UQ88 783 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 R3HCC1Q9Y3T6 440 aaKnown RBP6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 PCDHB12Q9Y5F1 795 aa6.72□□□□□ -1.33
HMGB1P48-201ENST00000446155 A0A087WZG4 1122 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 WASH4PA8MWX3 477 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 H3BS24 57 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 ZNF445P59923 1031 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 SPRED2Q7Z698 418 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 VSIG10LQ86VR7 867 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 STK11IPQ8N1F8 1099 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 DAGLBQ8NCG7 672 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 TRIM55Q9BYV6 548 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 ST7Q9NRC1 585 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.34
HMGB1P48-201ENST00000446155 SUSD5O60279 629 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 DDAH1O94760 285 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 PRAMEF1O95521 474 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 ESR1P03372 595 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 RASA3Q14644 834 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 AOC3Q16853 763 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 HEATR6Q6AI08 1181 aaKnown RBP6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 LRP10Q7Z4F1 713 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 FAM177A1Q8N128 213 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 MKL1Q969V6 931 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 LNPKQ9C0E8 428 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 CCDC113Q9H0I3 377 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 TRIT1Q9H3H1 467 aaKnown RBP6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 ATP13A1Q9HD20 1204 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 GPATCH2Q9NW75 528 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 GFOD1Q9NXC2 390 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 WHRNQ9P202 907 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 ZSWIM5Q9P217 1185 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 FHOD1Q9Y613 1164 aa6.7□□□□□ -1.34
HMGB1P48-201ENST00000446155 ANKRD34BA5PLL1 514 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 HYAL3O43820 417 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 CD96P40200 585 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 CTSKP43235 329 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 BNIP3Q12983 259 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 ARTNQ5T4W7 220 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 TMPRSS7Q7RTY8 843 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 PMFBP1Q8TBY8 1022 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 ASB11Q8WXH4 323 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 UBE2FQ969M7 185 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 OSBPL2Q9H1P3 480 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 CHST7Q9NS84 486 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 APEX2Q9UBZ4 518 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 FBXL21Q9UKT6 434 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 MINPP1Q9UNW1 487 aa6.69□□□□□ -1.34
HMGB1P48-201ENST00000446155 CAPNS1P04632 268 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 CD8BP10966 210 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 ITGA4P13612 1032 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 TPP2P29144 1249 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 RASGRF1Q13972 1273 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 SLC10A6Q3KNW5 377 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 ZNF574Q6ZN55 896 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 ARHGEF39Q8N4T4 335 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 ZNF655Q8N720 491 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 FGD4Q96M96 766 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 PAK6Q9NQU5 681 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 SLC5A6Q9Y289 635 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 ZNF281Q9Y2X9 895 aa6.68□□□□□ -1.34
HMGB1P48-201ENST00000446155 FAM221BA6H8Z2 402 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 U2SURPO15042 1029 aaKnown RBP6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 NAT2P11245 290 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 TCEAL1Q15170 157 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 ST13P5Q8NFI4 369 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 BRF1Q92994 677 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 ZNF669Q96BR6 464 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 GBP3Q9H0R5 595 aa6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 ASCC2Q9H1I8 757 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P48-201ENST00000446155 EPN3Q9H201 632 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms