RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 RRP12Q5JTH9 1297 aaKnown RBP23.27■■□□□ 1.32
NELFE-206ENST00000444811 PRPF38BQ5VTL8 546 aaKnown RBP23.27■■□□□ 1.32
NELFE-206ENST00000444811 GMCL1P1Q8NEA9 526 aa23.27■■□□□ 1.32
NELFE-206ENST00000444811 TOMM22Q9NS69 142 aa23.27■■□□□ 1.32
NELFE-206ENST00000444811 PCP11498 1178 aaKnown RBP23.26■■□□□ 1.31
NELFE-206ENST00000444811 IRF5Q13568 498 aa23.26■■□□□ 1.31
NELFE-206ENST00000444811 BMP2KLQ5H9B9 411 aa23.26■■□□□ 1.31
NELFE-206ENST00000444811 MFSD6Q6ZSS7 791 aa23.26■■□□□ 1.31
NELFE-206ENST00000444811 MAPK4P31152 587 aa23.25■■□□□ 1.31
NELFE-206ENST00000444811 GRK4P32298 578 aa23.25■■□□□ 1.31
NELFE-206ENST00000444811 RNF41Q9H4P4 317 aaPredicted RBP23.25■■□□□ 1.31
NELFE-206ENST00000444811 TCP11L1Q9NUJ3 509 aa23.25■■□□□ 1.31
NELFE-206ENST00000444811 CTNNA3Q9UI47 895 aa23.25■■□□□ 1.31
NELFE-206ENST00000444811 PPP1R9AQ9ULJ8 1098 aa23.25■■□□□ 1.31
NELFE-206ENST00000444811 ADAMTS5Q9UNA0 930 aa23.25■■□□□ 1.31
NELFE-206ENST00000444811 IMMTQ16891 758 aaKnown RBP23.24■■□□□ 1.31
NELFE-206ENST00000444811 GPR142Q7Z601 462 aa23.24■■□□□ 1.31
NELFE-206ENST00000444811 MB21D1Q8N884 522 aa23.24■■□□□ 1.31
NELFE-206ENST00000444811 STX8Q9UNK0 236 aa23.24■■□□□ 1.31
NELFE-206ENST00000444811 ADCY3O60266 1144 aa23.23■■□□□ 1.31
NELFE-206ENST00000444811 PPP4R3BQ5MIZ7 849 aa23.23■■□□□ 1.31
NELFE-206ENST00000444811 SLFN13Q68D06 897 aa23.23■■□□□ 1.31
NELFE-206ENST00000444811 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
NELFE-206ENST00000444811 NBPF11Q86T75 865 aa23.23■■□□□ 1.31
NELFE-206ENST00000444811 REPS2Q8NFH8 660 aa23.23■■□□□ 1.31
NELFE-206ENST00000444811 MOV10L1Q9BXT6 1211 aaKnown RBP23.23■■□□□ 1.31
NELFE-206ENST00000444811 PCDH10Q9P2E7 1040 aa23.23■■□□□ 1.31
NELFE-206ENST00000444811 COL11A1P12107 1806 aaPredicted RBP23.23■■□□□ 1.31
NELFE-206ENST00000444811 CCNA1P78396 465 aa23.22■■□□□ 1.31
NELFE-206ENST00000444811 MORN1Q5T089 497 aa23.22■■□□□ 1.31
NELFE-206ENST00000444811 PLEKHH3Q7Z736 793 aa23.22■■□□□ 1.31
NELFE-206ENST00000444811 SLAIN1Q8ND83 568 aa23.22■■□□□ 1.31
NELFE-206ENST00000444811 PXYLP1Q8TE99 480 aa23.22■■□□□ 1.31
NELFE-206ENST00000444811 USP6NLQ92738 828 aa23.22■■□□□ 1.31
NELFE-206ENST00000444811 SPATC1LQ9H0A9 340 aa23.22■■□□□ 1.31
NELFE-206ENST00000444811 ELNP15502 786 aa23.21■■□□□ 1.31
NELFE-206ENST00000444811 TMEM132BQ14DG7 1078 aa23.21■■□□□ 1.31
NELFE-206ENST00000444811 RCSD1Q6JBY9 416 aa23.21■■□□□ 1.31
NELFE-206ENST00000444811 RASGRP2Q7LDG7 609 aa23.21■■□□□ 1.31
NELFE-206ENST00000444811 ESR2Q92731 530 aa23.21■■□□□ 1.31
NELFE-206ENST00000444811 SLF1Q9BQI6 1058 aa23.21■■□□□ 1.31
NELFE-206ENST00000444811 RBBP6Q7Z6E9 1792 aaKnown RBP23.21■■□□□ 1.31
NELFE-206ENST00000444811 POTEFA5A3E0 1075 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 VWA5AO00534 786 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 BMP3P12645 472 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 MTFR1Q15390 333 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 ERICH6BQ5W0A0 696 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.3
NELFE-206ENST00000444811 SOCS4Q8WXH5 440 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 GMCL1Q96IK5 515 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 NUDT12Q9BQG2 462 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 TMEM47Q9BQJ4 181 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 ESYT1Q9BSJ8 1104 aa23.2■■□□□ 1.3
NELFE-206ENST00000444811 B4E1Z4 1266 aa23.19■■□□□ 1.3
NELFE-206ENST00000444811 KDM4AO75164 1064 aa23.19■■□□□ 1.3
NELFE-206ENST00000444811 MYCP01106 439 aaPredicted RBP23.19■■□□□ 1.3
NELFE-206ENST00000444811 CYP21A2P08686 494 aa23.19■■□□□ 1.3
NELFE-206ENST00000444811 ERCC3P19447 782 aa23.19■■□□□ 1.3
NELFE-206ENST00000444811 SHCBP1Q8NEM2 672 aa23.19■■□□□ 1.3
NELFE-206ENST00000444811 MAP4K1Q92918 833 aa23.19■■□□□ 1.3
NELFE-206ENST00000444811 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
NELFE-206ENST00000444811 ZNF214Q9UL59 606 aaPredicted RBP23.19■■□□□ 1.3
NELFE-206ENST00000444811 TOP1P11387 765 aaKnown RBP23.18■■□□□ 1.3
NELFE-206ENST00000444811 CYP2B6P20813 491 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 PTPREP23469 700 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 MCCP23508 829 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 NT5C2P49902 561 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 PLS1Q14651 629 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 CHMP4CQ96CF2 233 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 ZKSCAN3Q9BRR0 538 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 FEM1BQ9UK73 627 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 TAF6LQ9Y6J9 622 aa23.18■■□□□ 1.3
NELFE-206ENST00000444811 U3KPZ7 1027 aaPredicted RBP23.18■■□□□ 1.3
NELFE-206ENST00000444811 KIAA0100Q14667 2235 aaKnown RBP23.18■■□□□ 1.3
NELFE-206ENST00000444811 INHAP05111 366 aa23.17■■□□□ 1.3
NELFE-206ENST00000444811 SLC1A4P43007 532 aa23.17■■□□□ 1.3
NELFE-206ENST00000444811 GRB14Q14449 540 aa23.17■■□□□ 1.3
NELFE-206ENST00000444811 WDR78Q5VTH9 848 aa23.17■■□□□ 1.3
NELFE-206ENST00000444811 PRPF38AQ8NAV1 312 aaKnown RBP23.17■■□□□ 1.3
NELFE-206ENST00000444811 LSG1Q9H089 658 aaKnown RBP23.17■■□□□ 1.3
NELFE-206ENST00000444811 CWC22Q9HCG8 908 aaKnown RBP23.17■■□□□ 1.3
NELFE-206ENST00000444811 ZSWIM5Q9P217 1185 aa23.17■■□□□ 1.3
NELFE-206ENST00000444811 SLC15A5A6NIM6 579 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 TMEM232C9JQI7 657 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 RGS2P41220 211 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 MAP2K5Q13163 448 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 KCTD1Q719H9 257 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 RIOX2Q8IUF8 465 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 TRIB2Q92519 343 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 KIFC2Q96AC6 838 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 TTC14Q96N46 770 aa23.16■■□□□ 1.3
NELFE-206ENST00000444811 BIN2Q9UBW5 565 aaPredicted RBP23.16■■□□□ 1.3
NELFE-206ENST00000444811 ZNF236Q9UL36 1845 aa23.15■■□□□ 1.3
NELFE-206ENST00000444811 XRCC5P13010 732 aaKnown RBP23.15■■□□□ 1.3
NELFE-206ENST00000444811 UBXN2AP68543 259 aa23.15■■□□□ 1.3
NELFE-206ENST00000444811 NCAPG2Q86XI2 1143 aa23.15■■□□□ 1.3
NELFE-206ENST00000444811 DCAF4Q8WV16 495 aa23.15■■□□□ 1.3
NELFE-206ENST00000444811 KRT23Q9C075 422 aa23.15■■□□□ 1.3
NELFE-206ENST00000444811 CNNM2Q9H8M5 875 aa23.15■■□□□ 1.3
NELFE-206ENST00000444811 MTMR7Q9Y216 660 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms