RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NSUN6Q8TEA1 469 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 SMCR8Q8TEV9 937 aaPredicted RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 ZNF606Q8WXB4 792 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 TMEM74Q96NL1 305 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.58□□□□□ -1.68
UBR3-206ENST00000444475 PLSCR4Q9NRQ2 329 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 RRN3Q9NYV6 651 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 hCG_1642624A0A1W2PR95 340 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 SYNDIG1LA6NDD5 238 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 B4E171 279 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 RTCAO00442 366 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 USP17L7P0C7H9 530 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 IL6STP40189 918 aaPredicted RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 SLC45A4Q5BKX6 768 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 HEATR6Q6AI08 1181 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 UHMK1Q8TAS1 419 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 DDX1Q92499 740 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 C1orf74Q96LT6 269 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 RMDN3Q96TC7 470 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 F5H423 210 aaPredicted RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 SGTAO43765 313 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 IRS1P35568 1242 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 ZAP70P43403 619 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 CSE1LP55060 971 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 NLRP12P59046 1061 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 CCDC15Q0P6D6 951 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 MYBPC3Q14896 1274 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 CDC37L1Q7L3B6 337 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 CPA6Q8N4T0 437 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 TAB3Q8N5C8 712 aaPredicted RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 PHC3Q8NDX5 983 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 ZSCAN18Q8TBC5 510 aaPredicted RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 KCTD13Q8WZ19 329 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 TRIM56Q9BRZ2 755 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 DOLKQ9UPQ8 538 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 R3HCC1Q9Y3T6 440 aaKnown RBP4.58□□□□□ -1.68
UBR3-206ENST00000444475 ATAD2BQ9ULI0 1458 aa4.58□□□□□ -1.68
UBR3-206ENST00000444475 GOLGA6L22H0YM25 854 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 PYGLP06737 847 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 SDSP20132 328 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 MAPK9P45984 424 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 PDE12Q6L8Q7 609 aaKnown RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 SPATA5Q8NB90 893 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 JPH4Q96JJ6 628 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 RUSC1Q9BVN2 902 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 CCDC94Q9BW85 323 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 RPAP3Q9H6T3 665 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 SMC4Q9NTJ3 1288 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 PPT2Q9UMR5 302 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 CLEC11AQ9Y240 323 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 FRMPD2Q68DX3 1309 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 POTEB3A0JP26 581 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 PDGFAP04085 211 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 GZMAP12544 262 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 RHCEP18577 417 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 HOXA10P31260 410 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 RHDQ02161 417 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 SSRP1Q08945 709 aaKnown RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 MOGSQ13724 837 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 FNDC3BQ53EP0 1204 aaKnown RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 POTEBQ6S5H4 581 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 CCDC81Q6ZN84 652 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 SYDE1Q6ZW31 735 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 SPATS2Q86XZ4 545 aaKnown RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 GALNT12Q8IXK2 581 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 CHFRQ96EP1 664 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 ALPK1Q96QP1 1244 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 MYD88Q99836 296 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 CRTAC1Q9NQ79 661 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 CRYL1Q9Y2S2 319 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 CYP17A1P05093 508 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 GRK2P25098 689 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 SEPHS1P49903 392 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 LIMK1P53667 647 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 PPFIA1Q13136 1202 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 AP3B2Q13367 1082 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 SEPT7Q16181 437 aaKnown RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 POTEAQ6S8J7 498 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 SDCCAG8Q86SQ7 713 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 NLRP8Q86W28 1048 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 ZNF75CPQ92670 426 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 CENPIQ92674 756 aaPredicted RBP4.57□□□□□ -1.68
UBR3-206ENST00000444475 CHCHD6Q9BRQ6 235 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 DHRS4Q9BTZ2 278 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 TMEM106CQ9BVX2 250 aa4.57□□□□□ -1.68
UBR3-206ENST00000444475 C6orf229H3BNL8 230 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 PARP1P09874 1014 aaKnown RBP4.56□□□□□ -1.68
UBR3-206ENST00000444475 PLIN5Q00G26 463 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 G3BP1Q13283 466 aaKnown RBP eCLIP4.56□□□□□ -1.68
UBR3-206ENST00000444475 MEA1Q16626 185 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 TAF3Q5VWG9 929 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 NIFKQ9BYG3 293 aaKnown RBP4.56□□□□□ -1.68
UBR3-206ENST00000444475 ABCF3Q9NUQ8 709 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 UBP1Q9NZI7 540 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 PCSK1NQ9UHG2 260 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 FAM184BQ9ULE4 1060 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 A0A0G2JS52 829 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 UPK3BL1B0FP48 263 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 UPK3BL2E5RIL1 263 aa4.56□□□□□ -1.68
UBR3-206ENST00000444475 SLC34A2O95436 690 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms