RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ZMYM5Q9UJ78 669 aa7.7□□□□□ -1.18
VPS50-206ENST00000443443 SCAMP3O14828 347 aaKnown RBP7.69□□□□□ -1.18
VPS50-206ENST00000443443 LCE1DQ5T752 114 aa7.69□□□□□ -1.18
VPS50-206ENST00000443443 SPPL2CQ8IUH8 684 aa7.69□□□□□ -1.18
VPS50-206ENST00000443443 TMEM192Q8IY95 271 aa7.69□□□□□ -1.18
VPS50-206ENST00000443443 USHBP1Q8N6Y0 703 aa7.69□□□□□ -1.18
VPS50-206ENST00000443443 DAGLBQ8NCG7 672 aa7.69□□□□□ -1.18
VPS50-206ENST00000443443 SYTL5Q8TDW5 730 aaPredicted RBP7.69□□□□□ -1.18
VPS50-206ENST00000443443 SLC6A18Q96N87 628 aa7.69□□□□□ -1.18
VPS50-206ENST00000443443 MEIS1O00470 390 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 PCBP3P57721 371 aaKnown RBP7.68□□□□□ -1.18
VPS50-206ENST00000443443 RACK1P63244 317 aaKnown RBP7.68□□□□□ -1.18
VPS50-206ENST00000443443 TEKQ02763 1124 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 MESP2Q0VG99 397 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 DUSP4Q13115 394 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 SYDE1Q6ZW31 735 aaPredicted RBP7.68□□□□□ -1.18
VPS50-206ENST00000443443 ZNF655Q8N720 491 aaPredicted RBP7.68□□□□□ -1.18
VPS50-206ENST00000443443 TCTN2Q96GX1 697 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 SLC9A7Q96T83 725 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 HDAC8Q9BY41 377 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 FOXP3Q9BZS1 431 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 PRDM14Q9GZV8 571 aa7.68□□□□□ -1.18
VPS50-206ENST00000443443 DCP1AQ9NPI6 582 aaPredicted RBP7.68□□□□□ -1.18
VPS50-206ENST00000443443 DDX41Q9UJV9 622 aaKnown RBP7.68□□□□□ -1.18
VPS50-206ENST00000443443 FITM1A5D6W6 292 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 FKTNO75072 461 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 PRAMEF1O95521 474 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 IMPDH2P12268 514 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 RNF111Q6ZNA4 994 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 WAPLQ7Z5K2 1190 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 ZNF654Q8IZM8 581 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 DHRS1Q96LJ7 313 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 RNF32Q9H0A6 362 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 KCNK12Q9HB15 430 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 TCFL5Q9UL49 500 aa7.67□□□□□ -1.18
VPS50-206ENST00000443443 MEIS3P2A8K0S8 358 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 TNFRSF10CO14798 259 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 SYPP08247 313 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 C9orf131Q5VYM1 1079 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 LILRA2Q8N149 483 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 GPR160Q9UJ42 338 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 ZNRF3Q9ULT6 936 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 PPT2Q9UMR5 302 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 MINPP1Q9UNW1 487 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 PCDHB12Q9Y5F1 795 aa7.66□□□□□ -1.18
VPS50-206ENST00000443443 SIGLEC6O43699 453 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 RECKO95980 971 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 RAP1GAPP47736 663 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 CHRNEQ04844 493 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 SLC14A2Q15849 920 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 TIGD5Q53EQ6 642 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 INTS3Q68E01 1043 aaKnown RBP7.65□□□□□ -1.18
VPS50-206ENST00000443443 CCDC144CPQ8IYA2 1237 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 FBXO15Q8NCQ5 510 aaPredicted RBP7.65□□□□□ -1.18
VPS50-206ENST00000443443 MRRFQ96E11 262 aaKnown RBP7.65□□□□□ -1.18
VPS50-206ENST00000443443 CRBNQ96SW2 442 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 EPB41L4BQ9H329 900 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 CHST7Q9NS84 486 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 GFOD1Q9NXC2 390 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 EBF1Q9UH73 591 aa7.65□□□□□ -1.18
VPS50-206ENST00000443443 DBX1A6NMT0 343 aa7.64□□□□□ -1.19
VPS50-206ENST00000443443 VAMP1P23763 118 aa7.64□□□□□ -1.19
VPS50-206ENST00000443443 PAK2Q13177 524 aa7.64□□□□□ -1.19
VPS50-206ENST00000443443 AUHQ13825 339 aaKnown RBP7.64□□□□□ -1.19
VPS50-206ENST00000443443 ANKS4BQ8N8V4 417 aa7.64□□□□□ -1.19
VPS50-206ENST00000443443 LINC00116Q8NCU8 138 aa7.64□□□□□ -1.19
VPS50-206ENST00000443443 PPP1R16BQ96T49 567 aa7.64□□□□□ -1.19
VPS50-206ENST00000443443 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
VPS50-206ENST00000443443 TMEM253P0C7T8 217 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 ACRP10323 421 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 GALK1P51570 392 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 ZPBP2Q6X784 338 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 SIRT2Q8IXJ6 389 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 LINC01599Q8WXQ3 324 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 KCNN1Q92952 543 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 TM9SF2Q99805 663 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 SP110Q9HB58 689 aa7.63□□□□□ -1.19
VPS50-206ENST00000443443 SUCOQ9UBS9 1254 aaKnown RBP7.63□□□□□ -1.19
VPS50-206ENST00000443443 NFIBO00712 420 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 PSPNO60542 156 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 TP53P04637 393 aaPredicted RBP7.62□□□□□ -1.19
VPS50-206ENST00000443443 PDE6BP35913 854 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 NR0B2Q15466 257 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 TDRD10Q5VZ19 366 aaKnown RBP7.62□□□□□ -1.19
VPS50-206ENST00000443443 CCDC81Q6ZN84 652 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 RUFY4Q6ZNE9 571 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 CEP128Q6ZU80 1094 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 NPM2Q86SE8 214 aaKnown RBP7.62□□□□□ -1.19
VPS50-206ENST00000443443 NT5DC4Q86YG4 428 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 DSCC1Q9BVC3 393 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 SLC6A17Q9H1V8 727 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 CWC22Q9HCG8 908 aaKnown RBP7.62□□□□□ -1.19
VPS50-206ENST00000443443 GINM1Q9NU53 330 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 FAM86C1Q9NVL1 165 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 EFR3BQ9Y2G0 817 aa7.62□□□□□ -1.19
VPS50-206ENST00000443443 C9IYK1 514 aa7.61□□□□□ -1.19
VPS50-206ENST00000443443 USP2O75604 605 aaPredicted RBP7.61□□□□□ -1.19
VPS50-206ENST00000443443 SNX17Q15036 470 aa7.61□□□□□ -1.19
VPS50-206ENST00000443443 NOL9Q5SY16 702 aaKnown RBP7.61□□□□□ -1.19
VPS50-206ENST00000443443 TMEM132EQ6IEE7 984 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms