RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 MMEP08473 750 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 CALML3P27482 149 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 INF2Q27J81 1249 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 SFMBT2Q5VUG0 894 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 NUGGCQ68CJ6 796 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 GSPT2Q8IYD1 628 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 CCDC13Q8IYE1 715 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 MRRFQ96E11 262 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 HIC2Q96JB3 615 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 ATP6V1G3Q96LB4 118 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 ATP8A1Q9Y2Q0 1164 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 RXRAP19793 462 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 STXBP4Q6ZWJ1 553 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 RIN2Q8WYP3 895 aaPredicted RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 RILPQ96NA2 401 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 LSG1Q9H089 658 aaKnown RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 CSRNP2Q9H175 543 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 PAG1Q9NWQ8 432 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 CTDP1Q9Y5B0 961 aaPredicted RBP11.35□□□□□ -0.59
LIN54-202ENST00000442461 ADGRG1Q9Y653 693 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 CCDC61Q9Y6R9 512 aa11.35□□□□□ -0.59
LIN54-202ENST00000442461 THOC2Q8NI27 1593 aaKnown RBP11.34□□□□□ -0.59
LIN54-202ENST00000442461 SKAP2O75563 359 aaPredicted RBP11.34□□□□□ -0.59
LIN54-202ENST00000442461 UAP1Q16222 522 aaPredicted RBP11.34□□□□□ -0.59
LIN54-202ENST00000442461 ARHGEF18Q6ZSZ5 1173 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 ARMCX6Q7L4S7 300 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 CHMP6Q96FZ7 201 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 ZNF274Q96GC6 653 aaPredicted RBP11.34□□□□□ -0.59
LIN54-202ENST00000442461 NOD2Q9HC29 1040 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 ADGRF5Q8IZF2 1346 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 LSP1P33241 339 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 SERPINB6P35237 376 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 PPP2R2AP63151 447 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 EHHADHQ08426 723 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 ADCK5Q3MIX3 580 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 NME9Q86XW9 330 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 KIRREL3Q8IZU9 778 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 RMDN2Q96LZ7 410 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 BPIFA3Q9BQP9 254 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 AMFRQ9UKV5 643 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 GNAT1P11488 350 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 STMN1P16949 149 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 ZNF174Q15697 407 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 KIFAP3Q92845 792 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 FERMT2Q96AC1 680 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
LIN54-202ENST00000442461 ANO9A1A5B4 782 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 EEF2P13639 858 aaKnown RBP11.33□□□□□ -0.6
LIN54-202ENST00000442461 SLC39A14Q15043 492 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 CNNM4Q6P4Q7 775 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 SYCP3Q8IZU3 236 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 CXorf38Q8TB03 319 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 RNF217Q8TC41 542 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 STAMQ92783 540 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 PHACTR3Q96KR7 559 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
LIN54-202ENST00000442461 NLRP2Q9NX02 1062 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 NCOA3Q9Y6Q9 1424 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 GRM8O00222 908 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 RNF113AO15541 343 aaKnown RBP11.33□□□□□ -0.6
LIN54-202ENST00000442461 MFAP3LO75121 409 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 CXCR5P32302 372 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 RESTQ13127 1097 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 IQCB1Q15051 598 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 ARHGAP22Q7Z5H3 698 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 LONP2Q86WA8 852 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 HELLSQ9NRZ9 838 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 H3BQF6 201 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 TPP2P29144 1249 aaPredicted RBP11.33□□□□□ -0.6
LIN54-202ENST00000442461 ZNF76P36508 570 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 CUL1Q13616 776 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 ZNF449Q6P9G9 518 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 PGBD1Q96JS3 809 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 NUDCD1Q96RS6 583 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 NLRC4Q9NPP4 1024 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 L1RE1Q9UN81 338 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 PRDM2Q13029 1718 aa11.33□□□□□ -0.6
LIN54-202ENST00000442461 ARHGAP10A1A4S6 786 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 MAPK13O15264 365 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 AP1G2O75843 785 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 TRIM37O94972 964 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 DEUP1Q05D60 604 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
LIN54-202ENST00000442461 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 CARD10Q9BWT7 1032 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 373.1 ms