RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 FAM196BA6NMK8 535 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 POM121CA8CG34 1229 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L10C9JJH3 530 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 BAG3O95817 575 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 ADORA1P30542 326 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 HERVK_113P62684 666 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 LRRC26Q2I0M4 334 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 ALDH1L2Q3SY69 923 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 LYPD8Q6UX82 237 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 THSD4Q6ZMP0 1018 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 PLEKHH3Q7Z736 793 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 FAM9BQ8IZU0 186 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-215ENST00000441986 SSH1Q8WYL5 1049 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 EDC3Q96F86 508 aaKnown RBP7.58□□□□□ -1.2
HDAC9-215ENST00000441986 XAGE2Q96GT9 111 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 SENP6Q9GZR1 1112 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-215ENST00000441986 RBPJLQ9UBG7 517 aa7.58□□□□□ -1.2
HDAC9-215ENST00000441986 PFASO15067 1338 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 A0A1B0GUL7 405 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 MSCO60682 206 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 CCND3P30281 292 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-215ENST00000441986 ERVK-9P63128 1117 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 ERVK-24P63145 666 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 CCNA1P78396 465 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 ZNF697Q5TEC3 545 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 MFSD14CQ5VZR4 134 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 ATF7IPQ6VMQ6 1270 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 GPR142Q7Z601 462 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 TEX11Q8IYF3 940 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 CRACR2BQ8N4Y2 399 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-215ENST00000441986 SPATA5Q8NB90 893 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 USP6NLQ92738 828 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 NSUN4Q96CB9 384 aaKnown RBP7.57□□□□□ -1.2
HDAC9-215ENST00000441986 RAI14Q9P0K7 980 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 LRP2BPQ9P2M1 347 aa7.57□□□□□ -1.2
HDAC9-215ENST00000441986 E9PSI1 815 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 CNGA1P29973 690 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 ATP2B2Q01814 1243 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 TFCP2Q12800 502 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 RRP1BQ14684 758 aaKnown RBP7.56□□□□□ -1.2
HDAC9-215ENST00000441986 NR6A1Q15406 480 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L2Q6R6M4 530 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 TBC1D9Q6ZT07 1266 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 NYAP1Q6ZVC0 841 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
HDAC9-215ENST00000441986 ARRDC4Q8NCT1 418 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 LPAR1Q92633 364 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 GLMNQ92990 594 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 FAM161BQ96MY7 647 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 GUCD1Q96NT3 240 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 SEMA6BQ9H3T3 888 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 TXNRD2Q9NNW7 524 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 HMG20BQ9P0W2 317 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 PA2G4Q9UQ80 394 aaKnown RBP7.56□□□□□ -1.2
HDAC9-215ENST00000441986 RABGAP1Q9Y3P9 1069 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 EYSQ5T1H1 3165 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 RFX7Q2KHR2 1363 aa7.56□□□□□ -1.2
HDAC9-215ENST00000441986 VCANP13611 3396 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L15C9J2P7 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L11C9JVI0 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L18D6R9N7 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L22D6RA61 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L17D6RBQ6 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L19D6RCP7 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L20D6RJB6 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 SRGAP3O43295 1099 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 IGSF3O75054 1194 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 UQCRFS1P1P0C7P4 283 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 JUNDP17535 347 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 CCL14Q16627 93 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 MSS51Q4VC12 460 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 NAA16Q6N069 864 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-215ENST00000441986 SH3RF3Q8TEJ3 882 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-215ENST00000441986 ZNF384Q8TF68 577 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 TGFBRAP1Q8WUH2 860 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 CALR3Q96L12 384 aaKnown RBP7.55□□□□□ -1.2
HDAC9-215ENST00000441986 CDX2Q99626 313 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-215ENST00000441986 APBA2Q99767 749 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 PAGR1Q9BTK6 254 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 API5Q9BZZ5 524 aaKnown RBP7.55□□□□□ -1.2
HDAC9-215ENST00000441986 PORCNQ9H237 461 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 SMC4Q9NTJ3 1288 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 DDX20Q9UHI6 824 aaKnown RBP7.55□□□□□ -1.2
HDAC9-215ENST00000441986 IVNS1ABPQ9Y6Y0 642 aa7.55□□□□□ -1.2
HDAC9-215ENST00000441986 COL2A1P02458 1487 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-215ENST00000441986 CUL9Q8IWT3 2517 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 SLC15A5A6NIM6 579 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 DNM1LO00429 736 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 STRNO43815 780 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 PEX10O60683 326 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 HLA-DOAP06340 250 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 GNAI3P08754 354 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 USP14P54578 494 aa7.54□□□□□ -1.2
HDAC9-215ENST00000441986 G3BP1Q13283 466 aaKnown RBP eCLIP7.54□□□□□ -1.2
HDAC9-215ENST00000441986 PTPRNQ16849 979 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms