RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
SCAP-207ENST00000441517 FOXP1Q9H334 677 aaPredicted RBP16.92■□□□□ 0.3
SCAP-207ENST00000441517 BMP2KQ9NSY1 1161 aaPredicted RBP16.92■□□□□ 0.3
SCAP-207ENST00000441517 SRPRBQ9Y5M8 271 aaKnown RBP16.92■□□□□ 0.3
SCAP-207ENST00000441517 A0A087X0B3 334 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 ZNF76P36508 570 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 TBC1D10BQ4KMP7 808 aaPredicted RBP16.92■□□□□ 0.3
SCAP-207ENST00000441517 MXD3Q9BW11 206 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 AGXT2Q9BYV1 514 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 MRPL44Q9H9J2 332 aaKnown RBP16.92■□□□□ 0.3
SCAP-207ENST00000441517 SPA17Q15506 151 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 USH1GQ495M9 461 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 ZNF34Q8IZ26 560 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 EYA3Q99504 573 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 HDAC6Q9UBN7 1215 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
SCAP-207ENST00000441517 CTAGE15A4D2H0 777 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 CTAGE8P0CG41 777 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 CDC25BP30305 580 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 PLCD1P51178 756 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 MAEAQ7L5Y9 396 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 CTAGE6Q86UF2 777 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 CTAGE4Q8IX94 777 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 CALML4Q96GE6 196 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
SCAP-207ENST00000441517 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 GOLGA1Q92805 767 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 CHP1Q99653 195 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 FEZ1Q99689 392 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 SALL1Q9NSC2 1324 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
SCAP-207ENST00000441517 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
SCAP-207ENST00000441517 STAG1Q8WVM7 1258 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 TMEM260Q9NX78 707 aa16.91■□□□□ 0.3
SCAP-207ENST00000441517 IKBKBO14920 756 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 SLFN14P0C7P3 912 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAP-207ENST00000441517 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAP-207ENST00000441517 CAMTA2O94983 1202 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 RPN1P04843 607 aaKnown RBP16.9■□□□□ 0.3
SCAP-207ENST00000441517 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
SCAP-207ENST00000441517 CALM1P0DP23 149 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 CALM2P0DP24 149 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 CALM3P0DP25 149 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 BTDP43251 543 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 PIGSQ96S52 555 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
SCAP-207ENST00000441517 KRT31Q15323 416 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
SCAP-207ENST00000441517 ADAMTS3O15072 1205 aa16.89■□□□□ 0.29
SCAP-207ENST00000441517 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
SCAP-207ENST00000441517 UBE2SQ16763 222 aa16.89■□□□□ 0.29
SCAP-207ENST00000441517 KCTD1Q719H9 257 aa16.89■□□□□ 0.29
SCAP-207ENST00000441517 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.29
SCAP-207ENST00000441517 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
SCAP-207ENST00000441517 CABP7Q86V35 215 aa16.89■□□□□ 0.29
SCAP-207ENST00000441517 GSPT2Q8IYD1 628 aaKnown RBP16.89■□□□□ 0.29
SCAP-207ENST00000441517 PARD6BQ9BYG5 372 aa16.89■□□□□ 0.29
SCAP-207ENST00000441517 OSBPL5Q9H0X9 879 aaPredicted RBP16.89■□□□□ 0.29
SCAP-207ENST00000441517 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
SCAP-207ENST00000441517 MST1RQ04912 1400 aa16.89■□□□□ 0.29
SCAP-207ENST00000441517 ERVV-1B6SEH8 477 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 CHMP2AO43633 222 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 ABL1P00519 1130 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 NOP2P46087 812 aaKnown RBP16.88■□□□□ 0.29
SCAP-207ENST00000441517 KIAA0825Q8IV33 1275 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 IL17RAQ96F46 866 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 SLIT1O75093 1534 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 PRCPP42785 496 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 TTC19Q6DKK2 380 aaPredicted RBP16.88■□□□□ 0.29
SCAP-207ENST00000441517 CCDC148Q8NFR7 591 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
SCAP-207ENST00000441517 TRAF5O00463 557 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 BUB1O43683 1085 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 SYCP1Q15431 976 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 RAD9BQ6WBX8 426 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
SCAP-207ENST00000441517 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
SCAP-207ENST00000441517 RRP36Q96EU6 259 aaKnown RBP16.88■□□□□ 0.29
SCAP-207ENST00000441517 CALML3P27482 149 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 KLK7P49862 253 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 COPB1P53618 953 aaKnown RBP16.87■□□□□ 0.29
SCAP-207ENST00000441517 UBE4AQ14139 1066 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 LLGL1Q15334 1064 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 GRIK5Q16478 980 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 LINC00116Q8NCU8 138 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 ZC3H12CQ9C0D7 883 aaKnown RBP16.87■□□□□ 0.29
SCAP-207ENST00000441517 TMEM60Q9H2L4 133 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 ERLIN1O75477 346 aa16.87■□□□□ 0.29
SCAP-207ENST00000441517 FCER1AP12319 257 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms