RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PDCD2Q16342 344 aaPredicted RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 CCDC91Q7Z6B0 441 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 SLC7A5P1Q8MH63 180 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 AFAP1L1Q8TED9 768 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
SYNE2-206ENST00000441438 CPSF2Q9P2I0 782 aaKnown RBP11.95□□□□□ -0.5
SYNE2-206ENST00000441438 SKAP2O75563 359 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-206ENST00000441438 HSPA1AP0DMV8 641 aaKnown RBP11.94□□□□□ -0.5
SYNE2-206ENST00000441438 HSPA1BP0DMV9 641 aaKnown RBP11.94□□□□□ -0.5
SYNE2-206ENST00000441438 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 ARSHQ5FYA8 562 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 TAOK3Q9H2K8 898 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 MXI1P50539 228 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 SCNN1DP51172 638 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 DDX42Q86XP3 938 aaKnown RBP eCLIP11.94□□□□□ -0.5
SYNE2-206ENST00000441438 CARNMT1Q8N4J0 409 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 APPBP2Q92624 585 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 FRAT1Q92837 279 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-206ENST00000441438 GJD4Q96KN9 370 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-206ENST00000441438 PICK1Q9NRD5 415 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 SEPT10Q9P0V9 454 aa11.94□□□□□ -0.5
SYNE2-206ENST00000441438 F8W031 263 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-206ENST00000441438 LTKP29376 864 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 SEPHS1P49903 392 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 KIF22Q14807 665 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 WASHC4Q2M389 1173 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 MRPL9Q9BYD2 267 aaKnown RBP11.93□□□□□ -0.5
SYNE2-206ENST00000441438 LRRCC1Q9C099 1032 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 SCHIP1Q9P0W5 487 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-206ENST00000441438 ADGRL3Q9HAR2 1447 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-206ENST00000441438 PAHP00439 452 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 PGRP06401 933 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 SF3B3Q15393 1217 aaKnown RBP11.93□□□□□ -0.5
SYNE2-206ENST00000441438 SH3GL1Q99961 368 aa11.93□□□□□ -0.5
SYNE2-206ENST00000441438 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-206ENST00000441438 CCDC85CA6NKD9 419 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 SFTPCP11686 197 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 ATP2B4P23634 1241 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 GALNSP34059 522 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 HTR3AP46098 478 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 TNNI3KQ59H18 835 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 SPATS2Q86XZ4 545 aaKnown RBP11.92□□□□□ -0.5
SYNE2-206ENST00000441438 LRRC43Q8N309 656 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 EMILIN1Q9Y6C2 1016 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 MYBBP1AQ9BQG0 1328 aaKnown RBP11.92□□□□□ -0.5
SYNE2-206ENST00000441438 MOGSQ13724 837 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 NUGGCQ68CJ6 796 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 CCDC80Q76M96 950 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 GTF2IRD1Q9UHL9 959 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 GRK2P25098 689 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 ZBTB17Q13105 803 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 PDIA5Q14554 519 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 SLC5A9Q2M3M2 681 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-206ENST00000441438 EFCAB13Q8IY85 973 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.92□□□□□ -0.5
SYNE2-206ENST00000441438 ALG13Q9NP73 1137 aaKnown RBP11.92□□□□□ -0.5
SYNE2-206ENST00000441438 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
SYNE2-206ENST00000441438 KCNQ2O43526 872 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
SYNE2-206ENST00000441438 CTNNA1P35221 906 aaKnown RBP11.91□□□□□ -0.5
SYNE2-206ENST00000441438 CD86P42081 329 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 GNPTABQ3T906 1256 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 ARHGEF18Q6ZSZ5 1173 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 PHOX2BQ99453 314 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 TMCC2O75069 709 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 ATF4P18848 351 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-206ENST00000441438 RWDD2BP57060 319 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 ZSCAN29Q8IWY8 852 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-206ENST00000441438 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 BLOC1S4Q9NUP1 217 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 CALCOCO1Q9P1Z2 691 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 PFDN2Q9UHV9 154 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
SYNE2-206ENST00000441438 GFPT2O94808 682 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 KRT83P78385 493 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 LMNB2Q03252 620 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 LAPTM5Q13571 262 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
SYNE2-206ENST00000441438 DHTKD1Q96HY7 919 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-206ENST00000441438 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-206ENST00000441438 TRIM17Q9Y577 477 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 DGKBQ9Y6T7 804 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 ZSCAN9O15535 394 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-206ENST00000441438 RAD52P43351 418 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 RAC1P63000 192 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 NAT8LQ8N9F0 302 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 ANKRD24Q8TF21 1146 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 CLMNQ96JQ2 1002 aa11.9□□□□□ -0.5
SYNE2-206ENST00000441438 KATNAL1Q9BW62 490 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms