RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 AKR1B15C9JRZ8 316 aaPredicted RBP9.7□□□□□ -0.86
HPS4-206ENST00000439453 RNF113AO15541 343 aaKnown RBP9.7□□□□□ -0.86
HPS4-206ENST00000439453 VSNL1P62760 191 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 KIF4BQ2VIQ3 1234 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 ZNF569Q5MCW4 686 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 ATRIPQ8WXE1 791 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 MAN1B1Q9UKM7 699 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 M0R2C6 588 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 FOXN1O15353 648 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 PHACTR2O75167 634 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 RAD9BQ6WBX8 426 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 NEUROD6Q96NK8 337 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
HPS4-206ENST00000439453 COL1A1P02452 1464 aaPredicted RBP9.7□□□□□ -0.86
HPS4-206ENST00000439453 POLR2AP24928 1970 aaKnown RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 IGHMBP2P38935 993 aaKnown RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 HAND2P61296 217 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 NR1I3Q14994 352 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 CCDC57Q2TAC2 916 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 VPS37DQ86XT2 251 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 ENOX1Q8TC92 643 aaKnown RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 AIFM3Q96NN9 605 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 MAP3K14Q99558 947 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 CTAGE9A4FU28 777 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 GLTPD2A6NH11 291 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 KIF3CO14782 793 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 UFL1O94874 794 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 FGFR2P21802 821 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 MDM2Q00987 491 aaPredicted RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 C15orf52Q6ZUT6 534 aaKnown RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 TICAM2Q86XR7 235 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 TRMT44Q8IYL2 757 aaKnown RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 HELBQ8NG08 1087 aaPredicted RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 ACBD3Q9H3P7 528 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 DOCK2Q92608 1830 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 ANKRD65E5RJM6 399 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 PPIP5K2O43314 1243 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 MB21D2Q8IYB1 491 aaPredicted RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 DRC1Q96MC2 740 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 ALG1Q9BT22 464 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 FAM204AQ9H8W3 233 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 MED4Q9NPJ6 270 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 SAMSN1Q9NSI8 373 aaKnown RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 HOOK1Q9UJC3 728 aaKnown RBP9.69□□□□□ -0.86
HPS4-206ENST00000439453 GGA1Q9UJY5 639 aa9.69□□□□□ -0.86
HPS4-206ENST00000439453 CTAGE15A4D2H0 777 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 CTAGE8P0CG41 777 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 ATP2B1P20020 1258 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 CTAGE6Q86UF2 777 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 CTAGE4Q8IX94 777 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 MLKLQ8NB16 471 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 NAA15Q9BXJ9 866 aaKnown RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 DACH1Q9UI36 760 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 LRRIQ3A6PVS8 624 aaPredicted RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 PPFIA4O75335 1185 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 TFRCP02786 760 aaKnown RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 TUBBP07437 444 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 ATP2B4P23634 1241 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 ANTXR2P58335 489 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 IMMTQ16891 758 aaKnown RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 KRT40Q6A162 431 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 ELOA2Q8IYF1 753 aaPredicted RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 SLC35F6Q8N357 371 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 L3MBTL3Q96JM7 780 aaPredicted RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 NMRK2Q9NPI5 230 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 ZNF804BA4D1E1 1349 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 DDNO94850 711 aaPredicted RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 RBL2Q08999 1139 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 LDHAL6AQ6ZMR3 332 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 PPFIBP1Q86W92 1011 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 SUPT20HQ8NEM7 779 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 PLEKHA4Q9H4M7 779 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
HPS4-206ENST00000439453 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
HPS4-206ENST00000439453 CIAO1O76071 339 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 POSTNQ15063 836 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 WHAMMP3Q1A5X7 153 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 TTC39AQ5SRH9 613 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 RASGRP2Q7LDG7 609 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 EFCAB13Q8IY85 973 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 OSBP2Q969R2 916 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 MED15Q96RN5 788 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 DBNDD1Q9H9R9 158 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 EYA2O00167 538 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 TEX33O43247 280 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 ECE2O60344 883 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 CPP00450 1065 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 PRR29P0C7W0 189 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 SCNN1DP51172 638 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 TIMM10P62072 90 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 LARGE2Q8N3Y3 721 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 CPLX3Q8WVH0 158 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 NAPGQ99747 312 aaPredicted RBP9.67□□□□□ -0.86
HPS4-206ENST00000439453 NCAPGQ9BPX3 1015 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 DEF6Q9H4E7 631 aa9.67□□□□□ -0.86
HPS4-206ENST00000439453 LEMD3Q9Y2U8 911 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms