RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ANKRD39Q53RE8 183 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 NT5DC4Q86YG4 428 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 ZNF655Q8N720 491 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 PDZD8Q8NEN9 1154 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 LINC01599Q8WXQ3 324 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 TM9SF2Q99805 663 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 PRDM14Q9GZV8 571 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 EBF1Q9UH73 591 aa5.58□□□□□ -1.52
HMGB3P12-201ENST00000438745 GJA8P48165 433 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 SNW1Q13573 536 aaKnown RBP5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 TMC3Q7Z5M5 1100 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 LINC00116Q8NCU8 138 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 TCTN2Q96GX1 697 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 G6PC3Q9BUM1 346 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 GINM1Q9NU53 330 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 PRR13Q9NZ81 148 aa5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 SUCOQ9UBS9 1254 aaKnown RBP5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P12-201ENST00000438745 SIGLEC6O43699 453 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 FARP2O94887 1054 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 HK2P52789 917 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 CHMP4BP1P59074 171 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 AUHQ13825 339 aaKnown RBP5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 CLEC16AQ2KHT3 1053 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 TMEM67Q5HYA8 995 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 ZNF648Q5T619 568 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 RNF111Q6ZNA4 994 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 ABHD4Q8TB40 342 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 MYLIPQ8WY64 445 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 DHX38Q92620 1227 aaKnown RBP5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 LIN37Q96GY3 246 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 DHRS1Q96LJ7 313 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 SLC6A18Q96N87 628 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 ASCC2Q9H1I8 757 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 PPT2Q9UMR5 302 aa5.56□□□□□ -1.52
HMGB3P12-201ENST00000438745 C9IYK1 514 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 SHOXO15266 292 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 RAC2P15153 192 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 LTKP29376 864 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 PMS1P54277 932 aaKnown RBP5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 C9orf131Q5VYM1 1079 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 LILRA2Q8N149 483 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 BHLHE22Q8NFJ8 381 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 ZNF428Q96B54 188 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 ZNF512BQ96KM6 892 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 FERD3LQ96RJ6 166 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 TGIF2Q9GZN2 237 aa5.55□□□□□ -1.52
HMGB3P12-201ENST00000438745 TMEM82A0PJX8 343 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 LRRC10BA6NIK2 292 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 PRAMEF1O95521 474 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 GUCY2CP25092 1073 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 GIPRP48546 466 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 ZYXQ15942 572 aaKnown RBP5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 ZNF124Q15973 351 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 UNC5AQ6ZN44 842 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 RUFY4Q6ZNE9 571 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 SPPL2CQ8IUH8 684 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 C7orf61Q8IZ16 206 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 OXR1Q8N573 874 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 GPRASP2Q96D09 838 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 FAM84AQ96KN4 292 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 EFR3BQ9Y2G0 817 aa5.54□□□□□ -1.52
HMGB3P12-201ENST00000438745 FITM1A5D6W6 292 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 NOTOA8MTQ0 251 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 RBM25P49756 843 aaKnown RBP5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 PCBP3P57721 371 aaKnown RBP5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 CHRNEQ04844 493 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 SNX17Q15036 470 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 MLANAQ16655 118 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 BBS9Q3SYG4 887 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 PRR23BQ6ZRT6 265 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 ANKS4BQ8N8V4 417 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 SHISA4Q96DD7 197 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 FOXP3Q9BZS1 431 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 CHST7Q9NS84 486 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 TCFL5Q9UL49 500 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 MINPP1Q9UNW1 487 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 PCDHB12Q9Y5F1 795 aa5.53□□□□□ -1.52
HMGB3P12-201ENST00000438745 LTBP3Q9NS15 1303 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 BMP8BP34820 402 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 TRHRP34981 398 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 CTSKP43235 329 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 DUSP4Q13115 394 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 TIGD5Q53EQ6 642 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 PPFIBP1Q86W92 1011 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 SEC16BQ96JE7 1060 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 MKRN2Q9H000 416 aaKnown RBP5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 C19orf44Q9H6X5 657 aa5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P12-201ENST00000438745 ZNF205O95201 554 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 KRT1P04264 644 aa5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 KIR2DL1P43626 348 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 KIR2DL2P43627 348 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 CEBPAP49715 358 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 EIF6P56537 245 aaKnown RBP5.51□□□□□ -1.53
HMGB3P12-201ENST00000438745 AXDND1Q5T1B0 1012 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms