RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CST3P01034 146 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 SRFP11831 508 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 ATP2B1P20020 1258 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 LMNB1P20700 586 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 PAX3P23760 479 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 LTKP29376 864 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 GTF2F1P35269 517 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 CDK8P49336 464 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 MRPL58Q14197 206 aaKnown RBP4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 PLEKHG6Q3KR16 790 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 ZFYVE27Q5T4F4 411 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 DBX2Q6ZNG2 339 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 JAZF1Q86VZ6 243 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 OXR1Q8N573 874 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 SLC43A3Q8NBI5 491 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 ARMC5Q96C12 935 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 COX4I2Q96KJ9 171 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 TRIT1Q9H3H1 467 aaKnown RBP4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 PPM1HQ9ULR3 514 aa4.81□□□□□ -1.64
HMGB1P12-201ENST00000438594 MYOCOSA0A1B0GUC4 107 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 SH3BP5O60239 455 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 MCCP23508 829 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 CAP2P40123 477 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 ETV3P41162 512 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 MAPK8P45983 427 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 CLEC4GQ6UXB4 293 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 METTL16Q86W50 562 aaKnown RBP4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 IRF2BP1Q8IU81 584 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 RPUSD2Q8IZ73 545 aaKnown RBP4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 LILRA2Q8N149 483 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 PDZD8Q8NEN9 1154 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 PIWIL2Q8TC59 973 aaKnown RBP4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 INTS4Q96HW7 963 aaKnown RBP4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 ZSWIM4Q9H7M6 989 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 GPATCH2Q9NW75 528 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 GPR160Q9UJ42 338 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 PNMA2Q9UL42 364 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 COL4A3BPQ9Y5P4 624 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 SNCAIPQ9Y6H5 919 aa4.8□□□□□ -1.64
HMGB1P12-201ENST00000438594 SEMA7AO75326 666 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 SASH1O94885 1247 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 MAPK1P28482 360 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 GALK1P51570 392 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 ENOX2Q16206 610 aaKnown RBP4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 C4orf46Q504U0 113 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 TIGD5Q53EQ6 642 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 SCARA3Q6AZY7 606 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 TSHZ1Q6ZSZ6 1077 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 PRRT2Q7Z6L0 340 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 NT5DC4Q86YG4 428 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 ZCRB1Q8TBF4 217 aaKnown RBP4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 PMFBP1Q8TBY8 1022 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 KCNC2Q96PR1 638 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 SRCIN1Q9C0H9 1055 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 PCDH12Q9NPG4 1184 aa4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 TTF2Q9UNY4 1162 aaKnown RBP4.79□□□□□ -1.64
HMGB1P12-201ENST00000438594 TEX51A0A1B0GUA7 166 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 FITM1A5D6W6 292 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 PEX10O60683 326 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 TRIM13O60858 407 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 PGRP06401 933 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 ZGLP1P0C6A0 271 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 HSD3B2P26439 372 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 RHBDL3P58872 404 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 RBL2Q08999 1139 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 BMS1Q14692 1282 aaKnown RBP4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 SSPNQ14714 243 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 KRBA2Q6ZNG9 492 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 TMEM151BQ8IW70 566 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 SIRT2Q8IXJ6 389 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 MARCH10Q8NA82 808 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 GAL3ST3Q96A11 431 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 MTA3Q9BTC8 594 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 OSBPL7Q9BZF2 842 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 DUSP15Q9H1R2 295 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 DCTN4Q9UJW0 460 aa4.78□□□□□ -1.64
HMGB1P12-201ENST00000438594 PI3P19957 117 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 TBX4P57082 545 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 OS9Q13438 667 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 TTBK2Q6IQ55 1244 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 PPP1R13LQ8WUF5 828 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 STAG1Q8WVM7 1258 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 Q96M66 194 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 ASB16Q96NS5 453 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 SETDB2Q96T68 719 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 GMLQ99445 158 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 CAPN10Q9HC96 672 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 IFT57Q9NWB7 429 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 TJP2Q9UDY2 1190 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 G3BP2Q9UN86 482 aaKnown RBP4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 YBX2Q9Y2T7 364 aaKnown RBP4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 PCDHA11Q9Y5I1 949 aa4.77□□□□□ -1.65
HMGB1P12-201ENST00000438594 USP17L7P0C7H9 530 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 SEPT6Q14141 434 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 DSC3Q14574 896 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 RNF187Q5TA31 235 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 ERICH6BQ5W0A0 696 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 C11orf96Q7Z7L8 435 aa4.76□□□□□ -1.65
HMGB1P12-201ENST00000438594 SPPL2CQ8IUH8 684 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms