RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 ANXA13P27216 316 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 Q9H521 79 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 SFMBT2Q5VUG0 894 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 CCDC186Q7Z3E2 898 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 MAP7D3Q8IWC1 876 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
SCN4A-201ENST00000435607 PLB1Q6P1J6 1458 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 KLHL30Q0D2K2 578 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 ACBD5Q5T8D3 534 aaPredicted RBP12.3□□□□□ -0.44
SCN4A-201ENST00000435607 IGSF22Q8N9C0 903 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 SEPT8Q92599 483 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
SCN4A-201ENST00000435607 TTC25Q96NG3 672 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 TMEM247A6NEH6 219 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 SETSIPP0DME0 302 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 ALAS1P13196 640 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
SCN4A-201ENST00000435607 MMEL1Q495T6 779 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 LPIN2Q92539 896 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 FAN1Q9Y2M0 1017 aa12.3□□□□□ -0.44
SCN4A-201ENST00000435607 EIF3CLB5ME19 914 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 TBCCQ15814 346 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 PDCD2Q16342 344 aaPredicted RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 AOC3Q16853 763 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 EIF3CQ99613 913 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 TYW1Q9NV66 732 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 NACC1Q96RE7 527 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 RXRAP19793 462 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 STAT1P42224 750 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 EVCP57679 992 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 DNM1Q05193 864 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 RPS6KA1Q15418 735 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 MEIS3Q99687 375 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 SMIM24O75264 130 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 KCNA4P22459 653 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 XKR9Q5GH70 373 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 PNMA8AQ86V59 439 aaPredicted RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 PDZD8Q8NEN9 1154 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 SECISBP2LQ93073 1101 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 PGBD1Q96JS3 809 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 C14orf93Q9H972 538 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 SUGCTQ9HAC7 445 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 DONSONQ9NYP3 566 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 FNDC3AQ9Y2H6 1198 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 KIAA0586Q9BVV6 1533 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 B4E1Z4 1266 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 ARHGAP6O43182 974 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 ASPHQ12797 758 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 RNF219Q5W0B1 726 aaPredicted RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 CACTINQ8WUQ7 758 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 PPP1R12CQ9BZL4 782 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 VPS16Q9H269 839 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 AMFRQ9UKV5 643 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 TTC31Q49AM3 519 aaPredicted RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 APPBP2Q92624 585 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 LLPHQ9BRT6 129 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 CPSF2Q9P2I0 782 aaKnown RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 AKT3Q9Y243 479 aa12.29□□□□□ -0.44
SCN4A-201ENST00000435607 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
SCN4A-201ENST00000435607 TBC1D2Q9BYX2 928 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 ARPP21Q9UBL0 812 aaPredicted RBP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 CIITAP33076 1130 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 ANKRD36BP1Q96IX9 119 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 LRGUKQ96M69 825 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 BICC1Q9H694 974 aaKnown RBP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 ZNF215Q9UL58 517 aaPredicted RBP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 PDE6CP51160 858 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 SH3BGRP55822 239 aaPredicted RBP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 A0A1B0GUA9 196 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 CEP104O60308 925 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 TMCO4Q5TGY1 634 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 TTC30AQ86WT1 665 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 C2CD5Q86YS7 1000 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 SLC7A5P2Q9GIP4 190 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 A0A1B0GUL7 405 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 FAM95CA0A1B0GW59 222 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 CUTAO60888 179 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 PHEXP78562 749 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 PAK2Q13177 524 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 RNF10Q8N5U6 811 aaKnown RBP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 NVLO15381 856 aaKnown RBP12.28□□□□□ -0.44
SCN4A-201ENST00000435607 RNF40O75150 1001 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 TGFBRAP1Q8WUH2 860 aa12.28□□□□□ -0.44
SCN4A-201ENST00000435607 EYA2O00167 538 aa12.27□□□□□ -0.44
SCN4A-201ENST00000435607 KPNA2P52292 529 aaKnown RBP12.27□□□□□ -0.44
SCN4A-201ENST00000435607 GOLGA8FQ08AF8 430 aa12.27□□□□□ -0.44
SCN4A-201ENST00000435607 GOLGA8DPQ0D2H9 430 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms