RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 NBPF9Q3BBW0 867 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 ARSHQ5FYA8 562 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 NBPF12Q5TAG4 269 aaPredicted RBP7.04□□□□□ -1.28
PTPN4-205ENST00000433888 CDCP2Q5VXM1 449 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 DAGLBQ8NCG7 672 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 EHMT1Q9H9B1 1298 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
PTPN4-205ENST00000433888 TMEM82A0PJX8 343 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 EIF4A3P38919 411 aaKnown RBP7.03□□□□□ -1.28
PTPN4-205ENST00000433888 GALK1P51570 392 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 CLEC16AQ2KHT3 1053 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 CIAPIN1Q6FI81 312 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 LILRA6Q6PI73 481 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 RNF111Q6ZNA4 994 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 ZNF605Q86T29 641 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 NLRX1Q86UT6 975 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 SYTL4Q96C24 671 aaPredicted RBP7.03□□□□□ -1.28
PTPN4-205ENST00000433888 TCTN2Q96GX1 697 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 GMIPQ9P107 970 aa7.03□□□□□ -1.28
PTPN4-205ENST00000433888 TEX51A0A1B0GUA7 166 aa7.02□□□□□ -1.29
PTPN4-205ENST00000433888 SEMA7AO75326 666 aa7.02□□□□□ -1.29
PTPN4-205ENST00000433888 CRKP46108 304 aa7.02□□□□□ -1.29
PTPN4-205ENST00000433888 SNW1Q13573 536 aaKnown RBP7.02□□□□□ -1.29
PTPN4-205ENST00000433888 CWF19L2Q2TBE0 894 aaKnown RBP7.02□□□□□ -1.29
PTPN4-205ENST00000433888 TMC3Q7Z5M5 1100 aa7.02□□□□□ -1.29
PTPN4-205ENST00000433888 FOXP3Q9BZS1 431 aa7.02□□□□□ -1.29
PTPN4-205ENST00000433888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTPN4-205ENST00000433888 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
PTPN4-205ENST00000433888 GPR160Q9UJ42 338 aa7.02□□□□□ -1.29
PTPN4-205ENST00000433888 SUPT16HQ9Y5B9 1047 aaKnown RBP7.02□□□□□ -1.29
PTPN4-205ENST00000433888 MLECQ14165 292 aa7.01□□□□□ -1.29
PTPN4-205ENST00000433888 ZNF655Q8N720 491 aaPredicted RBP7.01□□□□□ -1.29
PTPN4-205ENST00000433888 ZNF296Q8WUU4 475 aaPredicted RBP7.01□□□□□ -1.29
PTPN4-205ENST00000433888 ATG4CQ96DT6 458 aa7.01□□□□□ -1.29
PTPN4-205ENST00000433888 ASCC2Q9H1I8 757 aaPredicted RBP7.01□□□□□ -1.29
PTPN4-205ENST00000433888 NRDCO43847 1150 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 NUAK1O60285 661 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 RAG1P15918 1043 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 RPL10P27635 214 aaKnown RBP7□□□□□ -1.29
PTPN4-205ENST00000433888 POLR2BP30876 1174 aaKnown RBP7□□□□□ -1.29
PTPN4-205ENST00000433888 PDE6BP35913 854 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 RNF4P78317 190 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 BBS9Q3SYG4 887 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 OVOS1Q6IE37 1185 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 LINC00116Q8NCU8 138 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 MAP6Q96JE9 813 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 SGPP1Q9BX95 441 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 IRF2BPLQ9H1B7 796 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 ADAMTS1Q9UHI8 967 aa7□□□□□ -1.29
PTPN4-205ENST00000433888 INHBBP09529 407 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 ITGAEP38570 1179 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 KIR2DL1P43626 348 aaPredicted RBP6.99□□□□□ -1.29
PTPN4-205ENST00000433888 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
PTPN4-205ENST00000433888 MRPL58Q14197 206 aaKnown RBP6.99□□□□□ -1.29
PTPN4-205ENST00000433888 CCDC27Q2M243 656 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 WAPLQ7Z5K2 1190 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 SIRT2Q8IXJ6 389 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 REXO1Q8N1G1 1221 aaKnown RBP6.99□□□□□ -1.29
PTPN4-205ENST00000433888 HHIPL1Q96JK4 782 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 PRDM14Q9GZV8 571 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 TCFL5Q9UL49 500 aa6.99□□□□□ -1.29
PTPN4-205ENST00000433888 USP2O75604 605 aaPredicted RBP6.98□□□□□ -1.29
PTPN4-205ENST00000433888 CCNFP41002 786 aa6.98□□□□□ -1.29
PTPN4-205ENST00000433888 CEBPAP49715 358 aaPredicted RBP6.98□□□□□ -1.29
PTPN4-205ENST00000433888 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
PTPN4-205ENST00000433888 CLCQ05315 142 aa6.98□□□□□ -1.29
PTPN4-205ENST00000433888 ZPBP2Q6X784 338 aa6.98□□□□□ -1.29
PTPN4-205ENST00000433888 CRTAC1Q9NQ79 661 aa6.98□□□□□ -1.29
PTPN4-205ENST00000433888 ZMYM5Q9UJ78 669 aa6.98□□□□□ -1.29
PTPN4-205ENST00000433888 OR14I1A6ND48 311 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 SIGLEC6O43699 453 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 PRAMEF1O95521 474 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 RAD51AP2Q09MP3 1159 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 TMEM132EQ6IEE7 984 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 NLRC3Q7RTR2 1065 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 ANTXR1Q9H6X2 564 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 UBP1Q9NZI7 540 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 MBD1Q9UIS9 605 aaPredicted RBP6.97□□□□□ -1.29
PTPN4-205ENST00000433888 MINPP1Q9UNW1 487 aa6.97□□□□□ -1.29
PTPN4-205ENST00000433888 HRKO00198 91 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 TNFRSF10CO14798 259 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 SYPP08247 313 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 NME1P15531 152 aaKnown RBP6.96□□□□□ -1.3
PTPN4-205ENST00000433888 CHMP4BP1P59074 171 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 SEZ6Q53EL9 994 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 SLITRK4Q8IW52 837 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 TMEM192Q8IY95 271 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 ZNF512BQ96KM6 892 aaPredicted RBP6.96□□□□□ -1.3
PTPN4-205ENST00000433888 PLCD4Q9BRC7 762 aa6.96□□□□□ -1.3
PTPN4-205ENST00000433888 GZF1Q9H116 711 aaPredicted RBP6.96□□□□□ -1.3
PTPN4-205ENST00000433888 MEIS3P2A8K0S8 358 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 FADS2P1A8MWK0 482 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 PRRG2O14669 202 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 PNLIPP16233 465 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 HOXA5P20719 270 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 YBX1P67809 324 aaKnown RBP6.95□□□□□ -1.3
PTPN4-205ENST00000433888 SSPNQ14714 243 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 ADGRF1Q5T601 910 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms