RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CYP2B6P20813 491 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 PTPREP23469 700 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 RGS2P41220 211 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 NT5C2P49902 561 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 WDR78Q5VTH9 848 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 PPP4R3CPQ6ZMV5 832 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 CENPQQ7L2Z9 268 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-207ENST00000430858 LRRC47Q8N1G4 583 aaKnown RBP11.62□□□□□ -0.55
HDAC6-207ENST00000430858 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 RUFY2Q8WXA3 655 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 USP6NLQ92738 828 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 MOV10L1Q9BXT6 1211 aaKnown RBP11.62□□□□□ -0.55
HDAC6-207ENST00000430858 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 RNF41Q9H4P4 317 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-207ENST00000430858 INCENPQ9NQS7 918 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 TOMM22Q9NS69 142 aa11.62□□□□□ -0.55
HDAC6-207ENST00000430858 RAD50Q92878 1312 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 SLC15A5A6NIM6 579 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 VWA5AO00534 786 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 ZNF213O14771 459 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 STRNO43815 780 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 SLC25A27O95847 323 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 CAPN2P17655 700 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 ERCC3P19447 782 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 GJA8P48165 433 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 NOVP48745 357 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 HAND2P61296 217 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 MAP2K5Q13163 448 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 PLS1Q14651 629 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 TMEM132BQ14DG7 1078 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 RRP12Q5JTH9 1297 aaKnown RBP11.61□□□□□ -0.55
HDAC6-207ENST00000430858 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-207ENST00000430858 MFSD6Q6ZSS7 791 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 TRIB2Q92519 343 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-207ENST00000430858 APBA2Q99767 749 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 MROH8Q9H579 483 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 IL17RBQ9NRM6 502 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 TCP11L1Q9NUJ3 509 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 FBXO28Q9NVF7 368 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 CTNNA3Q9UI47 895 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 STX8Q9UNK0 236 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
HDAC6-207ENST00000430858 ZKSCAN1P17029 563 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-207ENST00000430858 CHMLP26374 656 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 COPB2P35606 906 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 GRB14Q14449 540 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 SLFN13Q68D06 897 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 TBC1D10CQ8IV04 446 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 PRPF38AQ8NAV1 312 aaKnown RBP11.6□□□□□ -0.55
HDAC6-207ENST00000430858 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 NBPF3Q9H094 633 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 FEM1BQ9UK73 627 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 CENPFP49454 3210 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
HDAC6-207ENST00000430858 NMT2O60551 498 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 HOXC6P09630 235 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 BMP3P12645 472 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 STAT3P40763 770 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 SLC1A4P43007 532 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
HDAC6-207ENST00000430858 NCAPG2Q86XI2 1143 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 ABRAQ8N0Z2 381 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 U2AF1L4Q8WU68 220 aaKnown RBP11.59□□□□□ -0.55
HDAC6-207ENST00000430858 ESR2Q92731 530 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 IL25Q9H293 177 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 HMX1Q9NP08 348 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-207ENST00000430858 PAK6Q9NQU5 681 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-207ENST00000430858 ZNF214Q9UL59 606 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-207ENST00000430858 KIAA0100Q14667 2235 aaKnown RBP11.59□□□□□ -0.55
HDAC6-207ENST00000430858 RBBP6Q7Z6E9 1792 aaKnown RBP11.59□□□□□ -0.55
HDAC6-207ENST00000430858 DOCK3Q8IZD9 2030 aa11.59□□□□□ -0.55
HDAC6-207ENST00000430858 RLFQ13129 1914 aa11.58□□□□□ -0.55
HDAC6-207ENST00000430858 A0A0G2JMZ2 1700 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 ATP2A1O14983 1001 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 ZBED4O75132 1171 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 SGPL1O95470 568 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 FDX1P10109 184 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 TOP1P11387 765 aaKnown RBP11.58□□□□□ -0.56
HDAC6-207ENST00000430858 FCER1AP12319 257 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 ADORA2AP29274 412 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 STAT2P52630 851 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 MAP3K21Q5TCX8 1036 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 DPP9Q86TI2 863 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 FAM160B2Q86V87 743 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 CHURC1Q8WUH1 139 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 TTC14Q96N46 770 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 TEX13BQ9BXU2 312 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC6-207ENST00000430858 SLC5A4Q9NY91 659 aa11.58□□□□□ -0.56
HDAC6-207ENST00000430858 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-207ENST00000430858 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
HDAC6-207ENST00000430858 PLA2G6O60733 806 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms