RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 KCNH6Q9H252 994 aa12.28□□□□□ -0.44
ATG4B-211ENST00000429899 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
ATG4B-211ENST00000429899 ZBTB21Q9ULJ3 1066 aa12.28□□□□□ -0.44
ATG4B-211ENST00000429899 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 SSTR3P32745 418 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-211ENST00000429899 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 MTX1Q13505 466 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 RNF180Q86T96 592 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 SMC5Q8IY18 1101 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 GJD3Q8N144 294 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 TMEM199Q8N511 208 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 LENG1Q96BZ8 264 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-211ENST00000429899 PPP1R12CQ9BZL4 782 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.45
ATG4B-211ENST00000429899 C5orf42Q9H799 3197 aa12.26□□□□□ -0.45
ATG4B-211ENST00000429899 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-211ENST00000429899 RARBP10826 455 aa12.26□□□□□ -0.45
ATG4B-211ENST00000429899 ALADP13716 330 aa12.26□□□□□ -0.45
ATG4B-211ENST00000429899 SH3RF3Q8TEJ3 882 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-211ENST00000429899 C12orf42Q96LP6 360 aa12.26□□□□□ -0.45
ATG4B-211ENST00000429899 SIL1Q9H173 461 aa12.26□□□□□ -0.45
ATG4B-211ENST00000429899 MTIF3Q9H2K0 278 aaKnown RBP12.26□□□□□ -0.45
ATG4B-211ENST00000429899 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-211ENST00000429899 STARD7Q9NQZ5 370 aa12.26□□□□□ -0.45
ATG4B-211ENST00000429899 PNMA6EA0A0J9YXQ4 647 aa12.25□□□□□ -0.45
ATG4B-211ENST00000429899 ZBTB22O15209 634 aa12.25□□□□□ -0.45
ATG4B-211ENST00000429899 TAL1P17542 331 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-211ENST00000429899 ERICH6Q7L0X2 663 aa12.25□□□□□ -0.45
ATG4B-211ENST00000429899 OTOP2Q7RTS6 562 aa12.25□□□□□ -0.45
ATG4B-211ENST00000429899 METTL16Q86W50 562 aaKnown RBP12.25□□□□□ -0.45
ATG4B-211ENST00000429899 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
ATG4B-211ENST00000429899 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
ATG4B-211ENST00000429899 MAML3Q96JK9 1138 aa12.25□□□□□ -0.45
ATG4B-211ENST00000429899 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
ATG4B-211ENST00000429899 IL23AQ9NPF7 189 aa12.25□□□□□ -0.45
ATG4B-211ENST00000429899 EPOPA6NHQ4 379 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 ADAMTS4O75173 837 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 FGBP02675 491 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 VCAM1P19320 739 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 POU3F3P20264 500 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-211ENST00000429899 ACLYP53396 1101 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 POLA2Q14181 598 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 PDS5AQ29RF7 1337 aaKnown RBP12.24□□□□□ -0.45
ATG4B-211ENST00000429899 SPTY2D1Q68D10 685 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-211ENST00000429899 TBC1D9Q6ZT07 1266 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 NAV1Q8NEY1 1877 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 SSH3Q8TE77 659 aa12.24□□□□□ -0.45
ATG4B-211ENST00000429899 ZFHX2Q9C0A1 2572 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-211ENST00000429899 STRNO43815 780 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 GH2P01242 217 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 ERCC3P19447 782 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 CYP2C18P33260 490 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-211ENST00000429899 ATP8B2P98198 1209 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 PI16Q6UXB8 463 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 FAM178BQ8IXR5 827 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 ACER1Q8TDN7 264 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 DHX36Q9H2U1 1008 aaKnown RBP12.23□□□□□ -0.45
ATG4B-211ENST00000429899 CEP126Q9P2H0 1117 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 PALD1Q9ULE6 856 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 PCDHA11Q9Y5I1 949 aa12.23□□□□□ -0.45
ATG4B-211ENST00000429899 CACNA1BQ00975 2339 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 HMMRO75330 724 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 MAP4K4O95819 1239 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-211ENST00000429899 CDK7P50613 346 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 TIMM10P62072 90 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 CCSAPQ6IQ19 270 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-211ENST00000429899 FOXP4Q8IVH2 680 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-211ENST00000429899 MAPKAPK5Q8IW41 473 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 CRACR2BQ8N4Y2 399 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-211ENST00000429899 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 FEZ1Q99689 392 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 RPAP3Q9H6T3 665 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-211ENST00000429899 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 GINM1Q9NU53 330 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 SLC4A7Q9Y6M7 1214 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 TET1Q8NFU7 2136 aa12.22□□□□□ -0.45
ATG4B-211ENST00000429899 ROBO3Q96MS0 1386 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 FLT1P17948 1338 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 SYNRGQ9UMZ2 1314 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 MYADML2A6NDP7 307 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 ZBBXA8MT70 800 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 CA3P07451 260 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 ZNF865P0CJ78 1059 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-211ENST00000429899 KCNA10Q16322 511 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 SAMD1Q6SPF0 538 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-211ENST00000429899 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
ATG4B-211ENST00000429899 ARNTL2Q8WYA1 636 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms