RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CRHR2Q13324 411 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 AS3MTQ9HBK9 375 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 AGTPBP1Q9UPW5 1226 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 MAGEB6P1A0A0J9YX57 407 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 RRP1BQ14684 758 aaKnown RBP11.07□□□□□ -0.64
NEDD1-203ENST00000429527 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 A0A1W2PQ27 194 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 A0A1W2PQ64 194 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 A0A1W2PQD8 194 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 TRPA1O75762 1119 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 SNW1Q13573 536 aaKnown RBP11.07□□□□□ -0.64
NEDD1-203ENST00000429527 ARHGEF6Q15052 776 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 BLOC1S2Q6QNY1 142 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 ZKSCAN4Q969J2 545 aaPredicted RBP11.07□□□□□ -0.64
NEDD1-203ENST00000429527 CRNKL1Q9BZJ0 848 aaKnown RBP11.07□□□□□ -0.64
NEDD1-203ENST00000429527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEDD1-203ENST00000429527 AATFQ9NY61 560 aaKnown RBP eCLIP11.07□□□□□ -0.64
NEDD1-203ENST00000429527 IMPACTQ9P2X3 320 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 MORF4L1Q9UBU8 362 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 PTMAP06454 111 aaKnown RBP11.06□□□□□ -0.64
NEDD1-203ENST00000429527 LRRFIP1Q32MZ4 808 aaKnown RBP11.06□□□□□ -0.64
NEDD1-203ENST00000429527 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
NEDD1-203ENST00000429527 FAM13BQ9NYF5 915 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 FZD1Q9UP38 647 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 FRMPD3Q5JV73 1810 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 USP17L5A8MUK1 530 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 HLA-DOAP06340 250 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 ASNSP08243 561 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 GNAT2P19087 354 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 PARK7Q99497 189 aaKnown RBP11.06□□□□□ -0.64
NEDD1-203ENST00000429527 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 PICK1Q9NRD5 415 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 HELLSQ9NRZ9 838 aa11.06□□□□□ -0.64
NEDD1-203ENST00000429527 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 NCBP1Q09161 790 aaKnown RBP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 FAM227BQ96M60 508 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 CFAP45Q9UL16 551 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 FIBPO43427 364 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 SHMT1P34896 483 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 DYNLL1P63167 89 aaKnown RBP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 RBM10P98175 930 aaKnown RBP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 GABPB1Q06547 395 aaPredicted RBP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 TCP10Q12799 353 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 ZNF280CQ8ND82 737 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 APPBP2Q92624 585 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 ZNF274Q96GC6 653 aaPredicted RBP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 DCP1AQ9NPI6 582 aaPredicted RBP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 NOVP48745 357 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEDD1-203ENST00000429527 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
NEDD1-203ENST00000429527 KIF2AO00139 706 aaPredicted RBP11.04□□□□□ -0.64
NEDD1-203ENST00000429527 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 C16orf86Q6ZW13 317 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 TGFBRAP1Q8WUH2 860 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 KIAA1683Q9H0B3 1180 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 L2HGDHQ9H9P8 463 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 OGFRQ9NZT2 677 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 CTNNA3Q9UI47 895 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 ZBTB21Q9ULJ3 1066 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 MYPNQ86TC9 1320 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 GOLIM4O00461 696 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
NEDD1-203ENST00000429527 SP3Q02447 781 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.64
NEDD1-203ENST00000429527 ALX1Q15699 326 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
NEDD1-203ENST00000429527 IGHA2P01877 340 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 FGRP09769 529 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 GUCY1A2P33402 732 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 GCLCP48506 637 aaPredicted RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 IRF5Q13568 498 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 ZMYM1Q5SVZ6 1142 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 ZNF589Q86UQ0 364 aaPredicted RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 DHX40Q8IX18 779 aaKnown RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 STRBPQ96SI9 672 aaKnown RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 TNMDQ9H2S6 317 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 SERPINB13Q9UIV8 391 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 CEP350Q5VT06 3117 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 IDH1O75874 414 aaKnown RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 PRKG1Q13976 671 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 LCORLQ8N3X6 602 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 NSUN7Q8NE18 718 aaKnown RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 SPATA32Q96LK8 384 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 CCDC17Q96LX7 622 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 DACT1Q9NYF0 836 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 DDX41Q9UJV9 622 aaKnown RBP11.03□□□□□ -0.64
NEDD1-203ENST00000429527 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 IGKV6D-41A0A0C4DH26 115 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 PDHXO00330 501 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 CTDNEP1O95476 244 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 BACE1P56817 501 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 CCZ1BP86790 482 aa11.03□□□□□ -0.64
NEDD1-203ENST00000429527 CCZ1P86791 482 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms