RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SLC1A4P43007 532 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 MCM2P49736 904 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 CEBPZQ03701 1054 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 PKN1Q16512 942 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 SLFN13Q68D06 897 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 MCTP1Q6DN14 999 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 RASGRP4Q8TDF6 673 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 COA7Q96BR5 231 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 SH2B1Q9NRF2 756 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 ITGBL1O95965 494 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 MAP3K10Q02779 954 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 PNMA8AQ86V59 439 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 CTCFLQ8NI51 663 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 KIF3CO14782 793 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 IGSF3O75054 1194 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 NR5A1Q13285 461 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 USH1GQ495M9 461 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 FBXL16Q8N461 479 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
HMGCLL1-206ENST00000428842 WDR19Q8NEZ3 1342 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 CNTNAP5Q8WYK1 1306 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 TBC1D12O60347 775 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 PARP1P09874 1014 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 PCP11498 1178 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 EARS2Q5JPH6 523 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 ADGRF4Q8IZF3 695 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 FAM184AQ8NB25 1140 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 SMARCC2Q8TAQ2 1214 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 PGBD1Q96JS3 809 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZIC5Q96T25 663 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 ALG1Q9BT22 464 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 ASNSP08243 561 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 GRM4Q14833 912 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 SUPT20HL1Q3ZLR7 823 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 CCDC174Q6PII3 467 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 SCYL3Q8IZE3 742 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 MTMR6Q9Y217 621 aa11.05□□□□□ -0.64
HMGCLL1-206ENST00000428842 PLIN4Q96Q06 1357 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 PHIPQ8WWQ0 1821 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 WNT7AO00755 349 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 STX6O43752 255 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 PPP1R12BO60237 982 aaPredicted RBP11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 CTNND1O60716 968 aaKnown RBP11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 ATP2B1P20020 1258 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 NOVP48745 357 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZNF543Q08ER8 600 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 POTEEQ6S8J3 1075 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 HEATR3Q7Z4Q2 680 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 TANGO6Q9C0B7 1094 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 PICK1Q9NRD5 415 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 RBAK-RBAKDNI3L0D1 243 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 YY1P25490 414 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 OPTNQ96CV9 577 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 JMJD4Q9H9V9 463 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 HOMER2Q9NSB8 354 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZNF112Q9UJU3 913 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 TMX2Q9Y320 296 aa11.04□□□□□ -0.64
HMGCLL1-206ENST00000428842 COL2A1P02458 1487 aaPredicted RBP11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 DOCK1Q14185 1865 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 IFNAR1P17181 557 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 VCAM1P19320 739 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 SSRP1Q08945 709 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 LDHDQ86WU2 507 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 CPXCR1Q8N123 301 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 TMTC2Q8N394 836 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 TBC1D5Q92609 795 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 ANKS1AQ92625 1134 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 PURBQ96QR8 312 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 MRVI1Q9Y6F6 885 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 BTBD18B2RXH4 712 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 DDAH1O94760 285 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-206ENST00000428842 LAMA3Q16787 3333 aa11.02□□□□□ -0.64
HMGCLL1-206ENST00000428842 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 DNM1Q05193 864 aaKnown RBP11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 KRT40Q6A162 431 aa11.02□□□□□ -0.65
HMGCLL1-206ENST00000428842 GADL1Q6ZQY3 521 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms