RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MIER3Q7Z3K6 550 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 ZBTB38Q8NAP3 1195 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 IGSF1Q8N6C5 1336 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 AOX1Q06278 1338 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 KRT3P12035 628 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 RBBP5Q15291 538 aaKnown RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 GADL1Q6ZQY3 521 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 TRIM56Q9BRZ2 755 aaKnown RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 PNMA2Q9UL42 364 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 ADCY10Q96PN6 1610 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 MAP3K15Q6ZN16 1313 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 ZNF449Q6P9G9 518 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 C4orf50Q6ZRC1 276 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 FAM196AQ6ZSG2 479 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 PSPC1Q8WXF1 523 aaKnown RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 SNX21Q969T3 373 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 HVCN1Q96D96 273 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 MIS12Q9H081 205 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 V9GY48 417 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 ANKARQ7Z5J8 1434 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 ZNF532Q9HCE3 1301 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 H0YCG3 227 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 SLC27A2O14975 620 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 TUBB2AQ13885 445 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 TTC38Q5R3I4 469 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 C2CD5Q86YS7 1000 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 TUBB2BQ9BVA1 445 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 CCDC68Q9H2F9 335 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 TTF2Q9UNY4 1162 aaKnown RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 ERBB4Q15303 1308 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 FLOT1O75955 427 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 POLR2BP30876 1174 aaKnown RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 GTF2IP78347 998 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 PPP2R5BQ15173 497 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 NOP9Q86U38 636 aaKnown RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 C10orf67Q8IYJ2 551 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 IGSF22Q8N9C0 903 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.87□□□□□ -0.836e-14■□□□□ 9.9
CTNND1-208ENST00000428599 HAUS1Q96CS2 278 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 ERBB3P21860 1342 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 PAK1Q13153 545 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 BSPRYQ5W0U4 402 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 BRINP3Q76B58 766 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 MAPKAPK5Q8IW41 473 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 IFT20Q8IY31 132 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 ST7Q9NRC1 585 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 FAM8A1Q9UBU6 413 aa9.87□□□□□ -0.83
CTNND1-208ENST00000428599 IPO11Q9UI26 975 aaKnown RBP9.87□□□□□ -0.83
CTNND1-208ENST00000428599 RPS6KB1P23443 525 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 MCTP2Q6DN12 878 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 KRT27Q7Z3Y8 459 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 ABI1Q8IZP0 508 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 RSAD2Q8WXG1 361 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 NAPGQ99747 312 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 MGEA5O60502 916 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 S100BP04271 92 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 HPDP32754 393 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 ARHGAP27Q6ZUM4 889 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 SULF1Q8IWU6 871 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 GBP7Q8N8V2 638 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 TGFBRAP1Q8WUH2 860 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 P3H4Q92791 437 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 RBSNQ9H1K0 784 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 VPS16Q9H269 839 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 CLASP1Q7Z460 1538 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 GAS7O60861 476 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 STAM2O75886 525 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 TMOD1P28289 359 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 GTF2A1P52655 376 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 CTDSPL2Q05D32 466 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 FAM102BQ5T8I3 360 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 SECISBP2LQ93073 1101 aaKnown RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 SYNRGQ9UMZ2 1314 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 ELMSAN1Q6PJG2 1045 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 LMNTD2Q8IXW0 634 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 CCDC105Q8IYK2 499 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 USP44Q9H0E7 712 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 NT5C3AQ9H0P0 336 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 PPME1Q9Y570 386 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 PCCAP05165 728 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 KRT15P19012 456 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 HADHQ16836 314 aaKnown RBP9.86□□□□□ -0.83
CTNND1-208ENST00000428599 MFSD14BQ5SR56 506 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 PLEKHF1Q96S99 279 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 LRFN2Q9ULH4 789 aa9.86□□□□□ -0.83
CTNND1-208ENST00000428599 KDM3AQ9Y4C1 1321 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 SYT10Q6XYQ8 523 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 SKA2Q8WVK7 121 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-208ENST00000428599 ARHGEF2Q92974 986 aaKnown RBP9.85□□□□□ -0.83
CTNND1-208ENST00000428599 MMS19Q96T76 1030 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 VPS37BQ9H9H4 285 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 PLCB1Q9NQ66 1216 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 RAB20Q9NX57 234 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 HESX1Q9UBX0 185 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 ZBTB1Q9Y2K1 713 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 ERCC3P19447 782 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 RFC1P35251 1148 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-208ENST00000428599 FAM160A1Q05DH4 1040 aa9.85□□□□□ -0.83
CTNND1-208ENST00000428599 IFRD2Q12894 506 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms