RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 HK2P52789 917 aa8.7□□□□□ -1.02
C9orf3-205ENST00000427193 FBLN7Q53RD9 439 aa8.7□□□□□ -1.02
C9orf3-205ENST00000427193 NSUN3Q9H649 340 aaKnown RBP8.7□□□□□ -1.02
C9orf3-205ENST00000427193 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
C9orf3-205ENST00000427193 CFAP43Q8NDM7 1665 aa8.69□□□□□ -1.02
C9orf3-205ENST00000427193 F6X3S4 739 aa8.69□□□□□ -1.02
C9orf3-205ENST00000427193 ERCC3P19447 782 aa8.69□□□□□ -1.02
C9orf3-205ENST00000427193 GBP2P32456 591 aaPredicted RBP8.69□□□□□ -1.02
C9orf3-205ENST00000427193 DIRC2Q96SL1 478 aa8.69□□□□□ -1.02
C9orf3-205ENST00000427193 ADAMTS10Q9H324 1103 aa8.69□□□□□ -1.02
C9orf3-205ENST00000427193 REV1Q9UBZ9 1251 aa8.69□□□□□ -1.02
C9orf3-205ENST00000427193 VTI1BQ9UEU0 232 aa8.69□□□□□ -1.02
C9orf3-205ENST00000427193 TNNI2P48788 182 aa8.68□□□□□ -1.02
C9orf3-205ENST00000427193 ERVFC1P60507 584 aa8.68□□□□□ -1.02
C9orf3-205ENST00000427193 EGR3Q06889 387 aa8.68□□□□□ -1.02
C9orf3-205ENST00000427193 MPP2Q14168 576 aa8.68□□□□□ -1.02
C9orf3-205ENST00000427193 ANKLE2Q86XL3 938 aa8.68□□□□□ -1.02
C9orf3-205ENST00000427193 EPB41L4BQ9H329 900 aa8.68□□□□□ -1.02
C9orf3-205ENST00000427193 NFIBO00712 420 aa8.67□□□□□ -1.02
C9orf3-205ENST00000427193 HTR3BO95264 441 aa8.67□□□□□ -1.02
C9orf3-205ENST00000427193 ZCCHC11Q5TAX3 1644 aaKnown RBP8.67□□□□□ -1.02
C9orf3-205ENST00000427193 PDZD8Q8NEN9 1154 aa8.67□□□□□ -1.02
C9orf3-205ENST00000427193 ZSCAN18Q8TBC5 510 aaPredicted RBP8.67□□□□□ -1.02
C9orf3-205ENST00000427193 CCDC74BQ96LY2 380 aa8.67□□□□□ -1.02
C9orf3-205ENST00000427193 ASPNQ9BXN1 380 aa8.67□□□□□ -1.02
C9orf3-205ENST00000427193 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
C9orf3-205ENST00000427193 POLR3KQ9Y2Y1 108 aaPredicted RBP8.67□□□□□ -1.02
C9orf3-205ENST00000427193 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
C9orf3-205ENST00000427193 DISP1Q96F81 1524 aa8.66□□□□□ -1.02
C9orf3-205ENST00000427193 LTKP29376 864 aa8.66□□□□□ -1.02
C9orf3-205ENST00000427193 SNAP47Q5SQN1 464 aa8.66□□□□□ -1.02
C9orf3-205ENST00000427193 LILRA2Q8N149 483 aa8.66□□□□□ -1.02
C9orf3-205ENST00000427193 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
C9orf3-205ENST00000427193 KREMEN1Q96MU8 473 aa8.66□□□□□ -1.02
C9orf3-205ENST00000427193 KLHL3Q9UH77 587 aa8.66□□□□□ -1.02
C9orf3-205ENST00000427193 MADDQ8WXG6 1647 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 PHLDB1Q86UU1 1377 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 CHURC1-FNTBB4DL54 471 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 KRT1P04264 644 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 ZGLP1P0C6A0 271 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 C1QTNF9P0C862 333 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 CFPP27918 469 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 FAM160A1Q05DH4 1040 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 REC114Q7Z4M0 266 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 OXR1Q8N573 874 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 GOLM1Q8NBJ4 401 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.02
C9orf3-205ENST00000427193 KRTAP4-7Q9BYR0 210 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.02
C9orf3-205ENST00000427193 ARID4BQ4LE39 1312 aaPredicted RBP8.64□□□□□ -1.03
C9orf3-205ENST00000427193 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
C9orf3-205ENST00000427193 LRRN2O75325 713 aa8.64□□□□□ -1.03
C9orf3-205ENST00000427193 RAPGEF3O95398 923 aa8.64□□□□□ -1.03
C9orf3-205ENST00000427193 C1QL4Q86Z23 238 aa8.64□□□□□ -1.03
C9orf3-205ENST00000427193 LRRC56Q8IYG6 542 aaPredicted RBP8.64□□□□□ -1.03
C9orf3-205ENST00000427193 PHACTR4Q8IZ21 702 aa8.64□□□□□ -1.03
C9orf3-205ENST00000427193 BAHD1Q8TBE0 780 aaPredicted RBP8.64□□□□□ -1.03
C9orf3-205ENST00000427193 SP110Q9HB58 689 aa8.64□□□□□ -1.03
C9orf3-205ENST00000427193 FITM1A5D6W6 292 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 TMEM253P0C7T8 217 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 GARTP22102 1010 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 TAGLNQ01995 201 aaKnown RBP8.63□□□□□ -1.03
C9orf3-205ENST00000427193 MLECQ14165 292 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 NR0B2Q15466 257 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 FAM196AQ6ZSG2 479 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 SLC26A8Q96RN1 970 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 UGGT2Q9NYU1 1516 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 YEATS2Q9ULM3 1422 aa8.63□□□□□ -1.03
C9orf3-205ENST00000427193 MINDY4BA8MYZ0 360 aa8.62□□□□□ -1.03
C9orf3-205ENST00000427193 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
C9orf3-205ENST00000427193 SIAH1Q8IUQ4 282 aa8.62□□□□□ -1.03
C9orf3-205ENST00000427193 RNF32Q9H0A6 362 aa8.62□□□□□ -1.03
C9orf3-205ENST00000427193 ROBO2Q9HCK4 1378 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 IQGAP2Q13576 1575 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 DNAJA2O60884 412 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 GLDCP23378 1020 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 GBP1P32455 592 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 TRHRP34981 398 aaPredicted RBP8.61□□□□□ -1.03
C9orf3-205ENST00000427193 CHMP4BP1P59074 171 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 DUSP4Q13115 394 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 CWF19L2Q2TBE0 894 aaKnown RBP8.61□□□□□ -1.03
C9orf3-205ENST00000427193 ERMP1Q7Z2K6 904 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 FBXO27Q8NI29 283 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 VWCEQ96DN2 955 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 KIF2CQ99661 725 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 LRRC3Q9BY71 257 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 SLC6A17Q9H1V8 727 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 KCNQ5Q9NR82 932 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 CEP162Q5TB80 1403 aa8.61□□□□□ -1.03
C9orf3-205ENST00000427193 IQSEC2Q5JU85 1478 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 SHISA3A0PJX4 238 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 RGS13O14921 159 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 CHRNEQ04844 493 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 CLEC16AQ2KHT3 1053 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 IRF2BP1Q8IU81 584 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 SPPL2CQ8IUH8 684 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 ENOX1Q8TC92 643 aaKnown RBP8.6□□□□□ -1.03
C9orf3-205ENST00000427193 ASCC2Q9H1I8 757 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms