RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 LCORLQ8N3X6 602 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 BOLA2Q9H3K6 86 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TMEM39AQ9NV64 488 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 SLC4A4Q9Y6R1 1079 aa14.72□□□□□ -0.05
HLA-DQB3-203ENST00000425319 BRCA2P51587 3418 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TMEM265A0A087WTH1 108 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 MBD4O95243 580 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 EEF2P13639 858 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 AKR1B1P15121 316 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 ATP5JP18859 108 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 TLE2Q04725 743 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 UBE3CQ15386 1083 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 C12orf60Q5U649 245 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 DYNLL2Q96FJ2 89 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 RNPC3Q96LT9 517 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 CDX2Q99626 313 aaPredicted RBP14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 PHF24Q9UPV7 400 aa14.71□□□□□ -0.05
HLA-DQB3-203ENST00000425319 VWA5AO00534 786 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ADD2P35612 726 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SLC4A3P48751 1232 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 FPGSQ05932 587 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TMEM132BQ14DG7 1078 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SNX17Q15036 470 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 C16orf86Q6ZW13 317 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ZNF444Q8N0Y2 327 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PRPF38AQ8NAV1 312 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MAFAQ8NHW3 353 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 GPATCH3Q96I76 525 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 GLT1D1Q96MS3 346 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 STARD7Q9NQZ5 370 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ARPP21Q9UBL0 812 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MAST2Q6P0Q8 1798 aa14.7□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MROH7Q68CQ1 1323 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TCRBV5S4A2TA0A5A2 114 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MOXD2PA6NHM9 499 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TLR3O15455 904 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 CYP2D6P10635 497 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 RLBP1P12271 317 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 FOSL2P15408 326 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SLC44A5Q8NCS7 719 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PANK1Q8TE04 598 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TOX2Q96NM4 488 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 GUCD1Q96NT3 240 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 COL25A1Q9BXS0 654 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TEX13BQ9BXU2 312 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PDLIM7Q9NR12 457 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 FBXO40Q9UH90 709 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PPP1R9AQ9ULJ8 1098 aa14.69□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ZBED9Q6R2W3 1325 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PQBP1O60828 265 aaKnown RBP14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PGK1P00558 417 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 IGHA2P01877 340 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PGK2P07205 417 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 FDX1P10109 184 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ZNF792Q3KQV3 632 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 HAUS7Q99871 368 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SLF1Q9BQI6 1058 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ADAMTS5Q9UNA0 930 aa14.68□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PLXNB2O15031 1838 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TRIM43BA6NCK2 446 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 KIAA0355O15063 1070 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PRKAB2O43741 272 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SLC3A2P08195 630 aaKnown RBP14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PPP4R3BQ5MIZ7 849 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 C9orf50Q5SZB4 431 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 FAM83BQ5T0W9 1011 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 GIMAP6Q6P9H5 292 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ANKRD35Q8N283 1001 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TMEM199Q8N511 208 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 TRIM43Q96BQ3 446 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 LRRCC1Q9C099 1032 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MTIF3Q9H2K0 278 aaKnown RBP14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 NYAP2Q9P242 653 aa14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ZHX1Q9UKY1 873 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB3-203ENST00000425319 A0A1W2PQ45 241 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 A0A1W2PQY0 241 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 APPP05067 770 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 GNAT2P19087 354 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ACLYP53396 1101 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SNRNP48Q6IEG0 339 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 CTR9Q6PD62 1173 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 CCDC129Q6ZRS4 1044 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SIAH1Q8IUQ4 282 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 CPXCR1Q8N123 301 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MYLIPQ8WY64 445 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 GAS2L1Q99501 681 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ABHD16BQ9H3Z7 469 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ISY1Q9ULR0 285 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ELP1O95163 1332 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 SYNGAP1Q96PV0 1343 aa14.66□□□□□ -0.06
HLA-DQB3-203ENST00000425319 MYH1P12882 1939 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 F5H6K3 240 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 ZEB2O60315 1214 aa14.65□□□□□ -0.06
HLA-DQB3-203ENST00000425319 DUSP11O75319 330 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms