RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 CICQ96RK0 1608 aaPredicted RBP9.66□□□□□ -0.86
VPS8-204ENST00000424463 ATRNO75882 1429 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 F13A1P00488 732 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 WASHC5Q12768 1159 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 UBE3CQ15386 1083 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 IMMTQ16891 758 aaKnown RBP9.66□□□□□ -0.86
VPS8-204ENST00000424463 FAAH2Q6GMR7 532 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 TPTE2Q6XPS3 522 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 ARMC2Q8NEN0 867 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 ZC3H15Q8WU90 426 aaKnown RBP9.66□□□□□ -0.86
VPS8-204ENST00000424463 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 INCENPQ9NQS7 918 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 AKAP11Q9UKA4 1901 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 LRP5O75197 1615 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 KLRK1P26718 216 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
VPS8-204ENST00000424463 SCRN1Q12765 414 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 NOM1Q5C9Z4 860 aaKnown RBP9.65□□□□□ -0.86
VPS8-204ENST00000424463 PCGF5Q86SE9 256 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 GABPB2Q8TAK5 448 aaPredicted RBP9.65□□□□□ -0.86
VPS8-204ENST00000424463 GTF3C6Q969F1 213 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 DDX11Q96FC9 970 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 CEP63Q96MT8 703 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 STRBPQ96SI9 672 aaKnown RBP9.65□□□□□ -0.86
VPS8-204ENST00000424463 TRIM6Q9C030 488 aaPredicted RBP9.65□□□□□ -0.86
VPS8-204ENST00000424463 NYXQ9GZU5 481 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 NCOA5Q9HCD5 579 aaKnown RBP9.65□□□□□ -0.86
VPS8-204ENST00000424463 SCINQ9Y6U3 715 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 SPEF2Q9C093 1822 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 TAF1P21675 1872 aa9.65□□□□□ -0.86
VPS8-204ENST00000424463 ZNF213O14771 459 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 NPHP1O15259 732 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 RTN2O75298 545 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 TM4SF1P30408 202 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 RAB27AP51159 221 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 NFIXQ14938 502 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 FERMT3Q86UX7 667 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 PARP9Q8IXQ6 854 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 KIF18AQ8NI77 898 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 ARMT1Q9H993 441 aa9.65□□□□□ -0.87
VPS8-204ENST00000424463 EIF3FO00303 357 aaPredicted RBP9.64□□□□□ -0.87
VPS8-204ENST00000424463 PRKAB2O43741 272 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 HIP1RO75146 1068 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 MBD4O95243 580 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 TCF3P15923 654 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 PDE6BP35913 854 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 DNM1Q05193 864 aaKnown RBP9.64□□□□□ -0.87
VPS8-204ENST00000424463 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 SFSWAPQ12872 951 aaKnown RBP9.64□□□□□ -0.87
VPS8-204ENST00000424463 SNX1Q13596 522 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 ZSCAN23Q3MJ62 389 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 AGAP9Q5VTM2 703 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 FAM173BQ6P4H8 233 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 SPATA21Q7Z572 469 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 IFNLR1Q8IU57 520 aaPredicted RBP9.64□□□□□ -0.87
VPS8-204ENST00000424463 AIDAQ96BJ3 306 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 LRP2BPQ9P2M1 347 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 RRP15Q9Y3B9 282 aaKnown RBP9.64□□□□□ -0.87
VPS8-204ENST00000424463 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS8-204ENST00000424463 ZNF831Q5JPB2 1677 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 BCORQ6W2J9 1755 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
VPS8-204ENST00000424463 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 C3orf20Q8ND61 904 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 VMP1Q96GC9 406 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 MRFAP1L1Q96HT8 127 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 FAM84BQ96KN1 310 aaPredicted RBP9.64□□□□□ -0.87
VPS8-204ENST00000424463 CENPOQ9BU64 300 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 PHACTR1Q9C0D0 580 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 TFCP2L1Q9NZI6 479 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 CLIP2Q9UDT6 1046 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 TMCC3Q9ULS5 477 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 NHSQ6T4R5 1651 aa9.64□□□□□ -0.87
VPS8-204ENST00000424463 PRC1O43663 620 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 PFKFB2O60825 505 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 CTDNEP1O95476 244 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 PDIA3P30101 505 aaKnown RBP9.63□□□□□ -0.87
VPS8-204ENST00000424463 ANTXR2P58335 489 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 UBE4AQ14139 1066 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 IQCB1Q15051 598 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 POSTNQ15063 836 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 DBN1Q16643 649 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 CCDC80Q76M96 950 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 KRT27Q7Z3Y8 459 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 ADGRA1Q86SQ6 560 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 RAB11FIP4Q86YS3 637 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 TXLNBQ8N3L3 684 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 AGXT2Q9BYV1 514 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 MYO5AQ9Y4I1 1855 aaKnown RBP9.63□□□□□ -0.87
VPS8-204ENST00000424463 CA8P35219 290 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 NASPP49321 788 aaPredicted RBP9.63□□□□□ -0.87
VPS8-204ENST00000424463 PDE4BQ07343 736 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 KRT72Q14CN4 511 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 VPS37DQ86XT2 251 aa9.63□□□□□ -0.87
VPS8-204ENST00000424463 MB21D2Q8IYB1 491 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms