RNA–Protein interactions for RNA: ENST00000423918.5

LINC00963-203, long intergenic non-protein coding RNA 963, humanhuman

TSL 2 BASIC

Gene LINC00963, Length 1,654 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-203ENST00000423918 SREBF2Q12772 1141 aa16.78■□□□□ 0.28
LINC00963-203ENST00000423918 TROAPQ12815 778 aa16.78■□□□□ 0.28
LINC00963-203ENST00000423918 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
LINC00963-203ENST00000423918 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
LINC00963-203ENST00000423918 GMCL1Q96IK5 515 aa16.78■□□□□ 0.28
LINC00963-203ENST00000423918 PTPN18Q99952 460 aa16.78■□□□□ 0.28
LINC00963-203ENST00000423918 GPCPD1Q9NPB8 672 aa16.78■□□□□ 0.28
LINC00963-203ENST00000423918 AGTPBP1Q9UPW5 1226 aa16.78■□□□□ 0.28
LINC00963-203ENST00000423918 GOLGA8BA8MQT2 603 aa16.77■□□□□ 0.28
LINC00963-203ENST00000423918 WDR46O15213 610 aaKnown RBP16.77■□□□□ 0.28
LINC00963-203ENST00000423918 ZBTB43O43298 467 aa16.77■□□□□ 0.28
LINC00963-203ENST00000423918 DDAH1O94760 285 aa16.77■□□□□ 0.28
LINC00963-203ENST00000423918 INHBEP58166 350 aa16.77■□□□□ 0.28
LINC00963-203ENST00000423918 IKQ13123 557 aaPredicted RBP16.77■□□□□ 0.28
LINC00963-203ENST00000423918 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
LINC00963-203ENST00000423918 ALDH8A1Q9H2A2 487 aaPredicted RBP16.77■□□□□ 0.28
LINC00963-203ENST00000423918 TESPA1A2RU30 521 aaPredicted RBP16.76■□□□□ 0.27
LINC00963-203ENST00000423918 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
LINC00963-203ENST00000423918 FAM43AQ8N2R8 423 aa16.76■□□□□ 0.27
LINC00963-203ENST00000423918 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
LINC00963-203ENST00000423918 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 PDHXO00330 501 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 IGF2BP3O00425 579 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00963-203ENST00000423918 FLOT1O75955 427 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 PARP1P09874 1014 aaKnown RBP16.75■□□□□ 0.27
LINC00963-203ENST00000423918 CALM1P0DP23 149 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 CALM2P0DP24 149 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 CALM3P0DP25 149 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 SNHG28P0DPA3 235 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 ZNF543Q08ER8 600 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 STK3Q13188 491 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 TPCN1Q9ULQ1 816 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 LOC285556D6RIA3 1793 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 PDIA3P30101 505 aaKnown RBP16.75■□□□□ 0.27
LINC00963-203ENST00000423918 MAP2K2P36507 400 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00963-203ENST00000423918 CCT2P78371 535 aaKnown RBP16.75■□□□□ 0.27
LINC00963-203ENST00000423918 IRX3P78415 501 aaPredicted RBP16.75■□□□□ 0.27
LINC00963-203ENST00000423918 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00963-203ENST00000423918 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 ANKRD23Q86SG2 305 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
LINC00963-203ENST00000423918 GOLGA8AA7E2F4 631 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 CD2BP2O95400 341 aaKnown RBP16.74■□□□□ 0.27
LINC00963-203ENST00000423918 KIF5BP33176 963 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 SLC16A2P36021 539 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 TM4SF4P48230 202 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 STAT2P52630 851 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 EVCP57679 992 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 GRM4Q14833 912 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 ASPRV1Q53RT3 343 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 GPATCH4Q5T3I0 446 aaKnown RBP16.74■□□□□ 0.27
LINC00963-203ENST00000423918 OTUD7BQ6GQQ9 843 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 CATSPERGQ6ZRH7 1159 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 FANCBQ8NB91 859 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 CPVLQ9H3G5 476 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
LINC00963-203ENST00000423918 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 CYP2C8P10632 490 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 OSBPP22059 807 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-203ENST00000423918 RTN1Q16799 776 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 KIFC2Q96AC6 838 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 ZNF274Q96GC6 653 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-203ENST00000423918 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-203ENST00000423918 FEM1BQ9UK73 627 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 LIMCH1Q9UPQ0 1083 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 HPS5Q9UPZ3 1129 aa16.73■□□□□ 0.27
LINC00963-203ENST00000423918 PALM3A6NDB9 673 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 COG2Q14746 738 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 ME3Q16798 604 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 CMTR1Q8N1G2 835 aaKnown RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 CCDC82Q8N4S0 544 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 DHX16O60231 1041 aaKnown RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 LARGE1O95461 756 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 ADD1P35611 737 aaKnown RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 SMCR8Q8TEV9 937 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 P2RX7Q99572 595 aaKnown RBP16.72■□□□□ 0.27
LINC00963-203ENST00000423918 SLF1Q9BQI6 1058 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 SLC45A1Q9Y2W3 748 aa16.72■□□□□ 0.27
LINC00963-203ENST00000423918 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms