RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 DHX38Q92620 1227 aaKnown RBP6.9□□□□□ -1.3
LINC00397-201ENST00000422074 DHRS1Q96LJ7 313 aa6.9□□□□□ -1.3
LINC00397-201ENST00000422074 SLC6A18Q96N87 628 aa6.9□□□□□ -1.3
LINC00397-201ENST00000422074 SUCOQ9UBS9 1254 aaKnown RBP6.9□□□□□ -1.3
LINC00397-201ENST00000422074 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 FARP2O94887 1054 aaPredicted RBP6.89□□□□□ -1.31
LINC00397-201ENST00000422074 ERVFC1P60507 584 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 TMC3Q7Z5M5 1100 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 LINC00116Q8NCU8 138 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 BHLHE22Q8NFJ8 381 aaPredicted RBP6.89□□□□□ -1.31
LINC00397-201ENST00000422074 ABHD4Q8TB40 342 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 MYLIPQ8WY64 445 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 TCTN2Q96GX1 697 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 FERD3LQ96RJ6 166 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 G6PC3Q9BUM1 346 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 PRDM14Q9GZV8 571 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 EBF1Q9UH73 591 aa6.89□□□□□ -1.31
LINC00397-201ENST00000422074 FITM1A5D6W6 292 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 C8AP07357 584 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 HK2P52789 917 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 PMS1P54277 932 aaKnown RBP6.88□□□□□ -1.31
LINC00397-201ENST00000422074 ANKRD39Q53RE8 183 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 LILRA2Q8N149 483 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 OXR1Q8N573 874 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 LIN37Q96GY3 246 aaPredicted RBP6.88□□□□□ -1.31
LINC00397-201ENST00000422074 GINM1Q9NU53 330 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 PPT2Q9UMR5 302 aa6.88□□□□□ -1.31
LINC00397-201ENST00000422074 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.88□□□□□ -1.31
LINC00397-201ENST00000422074 LRRC10BA6NIK2 292 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 PRAMEF1O95521 474 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 GUCY2CP25092 1073 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 DUSP4Q13115 394 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 AUHQ13825 339 aaKnown RBP6.87□□□□□ -1.31
LINC00397-201ENST00000422074 LSRQ86X29 649 aaPredicted RBP6.87□□□□□ -1.31
LINC00397-201ENST00000422074 SPPL2CQ8IUH8 684 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 SMARCC1Q92922 1105 aaPredicted RBP6.87□□□□□ -1.31
LINC00397-201ENST00000422074 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 ZNF512BQ96KM6 892 aaPredicted RBP6.87□□□□□ -1.31
LINC00397-201ENST00000422074 FAM84AQ96KN4 292 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 TGIF2Q9GZN2 237 aa6.87□□□□□ -1.31
LINC00397-201ENST00000422074 TMEM82A0PJX8 343 aa6.86□□□□□ -1.31
LINC00397-201ENST00000422074 SHOXO15266 292 aa6.86□□□□□ -1.31
LINC00397-201ENST00000422074 PCBP3P57721 371 aaKnown RBP6.86□□□□□ -1.31
LINC00397-201ENST00000422074 CHRNEQ04844 493 aa6.86□□□□□ -1.31
LINC00397-201ENST00000422074 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
LINC00397-201ENST00000422074 C7orf61Q8IZ16 206 aa6.86□□□□□ -1.31
LINC00397-201ENST00000422074 ANKS4BQ8N8V4 417 aa6.86□□□□□ -1.31
LINC00397-201ENST00000422074 PCDHB12Q9Y5F1 795 aa6.86□□□□□ -1.31
LINC00397-201ENST00000422074 NOTOA8MTQ0 251 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 C9IYK1 514 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 GIPRP48546 466 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 SNX17Q15036 470 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 MLANAQ16655 118 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 ZNF648Q5T619 568 aaPredicted RBP6.85□□□□□ -1.31
LINC00397-201ENST00000422074 C9orf131Q5VYM1 1079 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 UNC5AQ6ZN44 842 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 C19orf47Q8N9M1 422 aaKnown RBP6.85□□□□□ -1.31
LINC00397-201ENST00000422074 OR6P1Q8NGX9 317 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 SYTL4Q96C24 671 aaPredicted RBP6.85□□□□□ -1.31
LINC00397-201ENST00000422074 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 MKRN2Q9H000 416 aaKnown RBP6.85□□□□□ -1.31
LINC00397-201ENST00000422074 CHST7Q9NS84 486 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 TCFL5Q9UL49 500 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 EFR3BQ9Y2G0 817 aa6.85□□□□□ -1.31
LINC00397-201ENST00000422074 CCDC9Q9Y3X0 531 aaKnown RBP6.85□□□□□ -1.31
LINC00397-201ENST00000422074 BMP8BP34820 402 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 CTSKP43235 329 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 KIR2DL1P43626 348 aaPredicted RBP6.84□□□□□ -1.31
LINC00397-201ENST00000422074 KIR2DL2P43627 348 aaPredicted RBP6.84□□□□□ -1.31
LINC00397-201ENST00000422074 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
LINC00397-201ENST00000422074 TIGD5Q53EQ6 642 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 RUFY4Q6ZNE9 571 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 PRR23BQ6ZRT6 265 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 PPFIBP1Q86W92 1011 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 SHISA4Q96DD7 197 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 SEC16BQ96JE7 1060 aa6.84□□□□□ -1.31
LINC00397-201ENST00000422074 CWC22Q9HCG8 908 aaKnown RBP6.84□□□□□ -1.31
LINC00397-201ENST00000422074 ZNF214Q9UL59 606 aaPredicted RBP6.84□□□□□ -1.31
LINC00397-201ENST00000422074 ARID1BQ8NFD5 2236 aaPredicted RBP6.84□□□□□ -1.32
LINC00397-201ENST00000422074 ZNF205O95201 554 aa6.83□□□□□ -1.32
LINC00397-201ENST00000422074 ENDOUP21128 410 aaKnown RBP6.83□□□□□ -1.32
LINC00397-201ENST00000422074 MAP6Q96JE9 813 aa6.83□□□□□ -1.32
LINC00397-201ENST00000422074 RNF32Q9H0A6 362 aa6.83□□□□□ -1.32
LINC00397-201ENST00000422074 GFOD1Q9NXC2 390 aa6.83□□□□□ -1.32
LINC00397-201ENST00000422074 LTBP3Q9NS15 1303 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 SYPP08247 313 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 RPL10P27635 214 aaKnown RBP6.82□□□□□ -1.32
LINC00397-201ENST00000422074 TRHRP34981 398 aaPredicted RBP6.82□□□□□ -1.32
LINC00397-201ENST00000422074 EIF6P56537 245 aaKnown RBP6.82□□□□□ -1.32
LINC00397-201ENST00000422074 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
LINC00397-201ENST00000422074 FBXW10Q5XX13 1052 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 MPZL3Q6UWV2 235 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 IRF2BP1Q8IU81 584 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 SHDQ96IW2 340 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 SRRTQ9BXP5 876 aaKnown RBP6.82□□□□□ -1.32
LINC00397-201ENST00000422074 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 YBX2Q9Y2T7 364 aaKnown RBP6.82□□□□□ -1.32
LINC00397-201ENST00000422074 SLC12A7Q9Y666 1083 aa6.82□□□□□ -1.32
LINC00397-201ENST00000422074 GSNP06396 782 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms