RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 USP17L21D6R901 530 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 HSPA1LP34931 641 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 RAD51AP2Q09MP3 1159 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 MYH3P11055 1940 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 MYH6P13533 1939 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 MYH8P13535 1937 aa17.12■□□□□ 0.33
SEMA3B-203ENST00000419007 RCAN1P53805 252 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 FUT2Q10981 343 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 PPP2R5BQ15173 497 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 TFR2Q9UP52 801 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 TROAPQ12815 778 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 NOA1Q8NC60 698 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 ATP2C1P98194 919 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 TCP11X2Q5H9J9 407 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 BBXQ8WY36 941 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 MTRQ99707 1265 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 RBM28Q9NW13 759 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
SEMA3B-203ENST00000419007 SEMA3EO15041 775 aa17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 TMTC3Q6ZXV5 915 aa17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 MAP2K7O14733 419 aa17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 ADAMTS3O15072 1205 aa17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 STAT6P42226 847 aa17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 HSP90B2PQ58FF3 399 aa17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 MYO6Q9UM54 1294 aa17.1■□□□□ 0.33
SEMA3B-203ENST00000419007 CAPN2P17655 700 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 PRCPP42785 496 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 SPAG1Q07617 926 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 TSR1Q2NL82 804 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 TMEM51Q9NW97 253 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 RWDD2AQ9UIY3 292 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 RPN1P04843 607 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 CAPZA3Q96KX2 299 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 HDAC6Q9UBN7 1215 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 EPN1Q9Y6I3 576 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 GTPBP6O43824 516 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 NPY5RQ15761 445 aa17.09■□□□□ 0.33
SEMA3B-203ENST00000419007 CALM1P0DP23 149 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 CALM2P0DP24 149 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 CALM3P0DP25 149 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 ARHGAP25P42331 645 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 E2F4Q16254 413 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 IL17AQ16552 155 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 EXOC4Q96A65 974 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 RIOK1Q9BRS2 568 aaKnown RBP17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 JAG2Q9Y219 1238 aa17.08■□□□□ 0.33
SEMA3B-203ENST00000419007 SCG2P13521 617 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 CASP8Q14790 479 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 WHAMMP3Q1A5X7 153 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 L1RE1Q9UN81 338 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 ITIH6Q6UXX5 1313 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 TTC26A0AVF1 554 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 VGLL3A8MV65 326 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 EXOC5O00471 708 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 MSANTD4Q8NCY6 345 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 TNFRSF25Q93038 417 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 GDAP1L1Q96MZ0 367 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.32
SEMA3B-203ENST00000419007 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 PP2D1A8MPX8 630 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 NDUFA10O95299 355 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 PARP1P09874 1014 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 MEX3CQ5U5Q3 659 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 CTR9Q6PD62 1173 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 HNRNPLLQ8WVV9 542 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 ACSBG1Q96GR2 724 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 PCMTD1Q96MG8 357 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 RAB21Q9UL25 225 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 LUC7L2Q9Y383 392 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 SRGAP2O75044 1071 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 TUBB2AQ13885 445 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 CCDC122Q5T0U0 273 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 TRIM47Q96LD4 638 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 TUBB2BQ9BVA1 445 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 NUP98P52948 1817 aa17.07■□□□□ 0.32
SEMA3B-203ENST00000419007 KIAA1328Q86T90 577 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms