RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 NMIQ13287 307 aaPredicted RBP4.05□□□□□ -1.76
VPS41-206ENST00000418457 LRP8Q14114 963 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 TCEAL1Q15170 157 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 DDR2Q16832 855 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 HEATR6Q6AI08 1181 aaKnown RBP4.05□□□□□ -1.76
VPS41-206ENST00000418457 TMC3Q7Z5M5 1100 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 VSIG10LQ86VR7 867 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 DTX1Q86Y01 620 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 CELF2-AS1Q8N7Q2 184 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 ENOX1Q8TC92 643 aaKnown RBP4.05□□□□□ -1.76
VPS41-206ENST00000418457 ASB11Q8WXH4 323 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 UBE2FQ969M7 185 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 HAUS7Q99871 368 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 DUSP15Q9H1R2 295 aaPredicted RBP4.05□□□□□ -1.76
VPS41-206ENST00000418457 ST7Q9NRC1 585 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 ANGEL1Q9UNK9 670 aaKnown RBP4.05□□□□□ -1.76
VPS41-206ENST00000418457 SLC5A6Q9Y289 635 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 SCO2A0A1W2PP80 73 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 SHISA3A0PJX4 238 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 SHOXO15266 292 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 CBFA2T2O43439 604 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 SIGLEC6O43699 453 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 GJB6O95452 261 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 PRNPP04156 253 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 EPHX1P07099 455 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 NAT2P11245 290 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 ITGA4P13612 1032 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 CD247P20963 164 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 TPP2P29144 1249 aaPredicted RBP4.04□□□□□ -1.76
VPS41-206ENST00000418457 BNIP3Q12983 259 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 NOL9Q5SY16 702 aaKnown RBP4.04□□□□□ -1.76
VPS41-206ENST00000418457 ADAT2Q7Z6V5 191 aaKnown RBP4.04□□□□□ -1.76
VPS41-206ENST00000418457 TSPYL5Q86VY4 417 aaPredicted RBP4.04□□□□□ -1.76
VPS41-206ENST00000418457 SYTL5Q8TDW5 730 aaPredicted RBP4.04□□□□□ -1.76
VPS41-206ENST00000418457 MICAL1Q8TDZ2 1067 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 BCL7CQ8WUZ0 217 aaPredicted RBP4.04□□□□□ -1.76
VPS41-206ENST00000418457 DSCC1Q9BVC3 393 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 HDAC8Q9BY41 377 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 KLHL25Q9H0H3 589 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 GBP3Q9H0R5 595 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 GP6Q9HCN6 339 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 CHST7Q9NS84 486 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 GFOD1Q9NXC2 390 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 PRR13Q9NZ81 148 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 SIRPGQ9P1W8 387 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 WHRNQ9P202 907 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 CCDC39Q9UFE4 941 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 ZNF451Q9Y4E5 1061 aa4.04□□□□□ -1.76
VPS41-206ENST00000418457 ANKRD34BA5PLL1 514 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 WASH4PA8MWX3 477 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 MEIS1O00470 390 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 SUSD5O60279 629 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 PPM1BO75688 479 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 PRAMEF1O95521 474 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 WNT11O96014 354 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 ZNF143P52747 638 aaPredicted RBP4.03□□□□□ -1.76
VPS41-206ENST00000418457 IKZF1Q13422 519 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 ANGEL2Q5VTE6 544 aaKnown RBP4.03□□□□□ -1.76
VPS41-206ENST00000418457 EEPD1Q7L9B9 569 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 TMPRSS7Q7RTY8 843 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 ZNF655Q8N720 491 aaPredicted RBP4.03□□□□□ -1.76
VPS41-206ENST00000418457 DAGLBQ8NCG7 672 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 FLCNQ8NFG4 579 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 FGD4Q96M96 766 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 APBA2Q99767 749 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 ATP13A1Q9HD20 1204 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 DUSP13Q9UII6 198 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 SUGT1Q9Y2Z0 365 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 FHOD1Q9Y613 1164 aa4.03□□□□□ -1.76
VPS41-206ENST00000418457 A0A087WZG4 1122 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 CCDC85CA6NKD9 419 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 HYAL3O43820 417 aaPredicted RBP4.02□□□□□ -1.77
VPS41-206ENST00000418457 CD8BP10966 210 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 LTKP29376 864 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 CD96P40200 585 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 ZNF445P59923 1031 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 SERINC3Q13530 473 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 GAB4Q2WGN9 574 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 ARTNQ5T4W7 220 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 MRM1Q6IN84 353 aaKnown RBP4.02□□□□□ -1.77
VPS41-206ENST00000418457 ZNF574Q6ZN55 896 aaPredicted RBP4.02□□□□□ -1.77
VPS41-206ENST00000418457 SPRED2Q7Z698 418 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 CREG2Q8IUH2 290 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 ADCY4Q8NFM4 1077 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 BRF1Q92994 677 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 PPP1R14AQ96A00 147 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 TCTN2Q96GX1 697 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 LNPKQ9C0E8 428 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 OSBPL2Q9H1P3 480 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 EPN3Q9H201 632 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 SUSD2Q9UGT4 822 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 MINPP1Q9UNW1 487 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 MSRB2Q9Y3D2 182 aa4.02□□□□□ -1.77
VPS41-206ENST00000418457 SSU72P8A0A1W2PR75 194 aa4.01□□□□□ -1.77
VPS41-206ENST00000418457 H0Y8X5 98 aa4.01□□□□□ -1.77
VPS41-206ENST00000418457 PDPK1O15530 556 aa4.01□□□□□ -1.77
VPS41-206ENST00000418457 ESR1P03372 595 aa4.01□□□□□ -1.77
VPS41-206ENST00000418457 GSNP06396 782 aa4.01□□□□□ -1.77
VPS41-206ENST00000418457 PCBP3P57721 371 aaKnown RBP4.01□□□□□ -1.77
VPS41-206ENST00000418457 ZP2Q05996 745 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms