RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
RFC1-203ENST00000418436 SP3Q02447 781 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 ICA1Q05084 483 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 CLEC10AQ8IUN9 316 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 FEZ1Q99689 392 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 ARHGEF10LQ9HCE6 1279 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
RFC1-203ENST00000418436 RLFQ13129 1914 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 MGAMO43451 1857 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 PARP14Q460N5 1801 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 ARHGAP33O14559 1287 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 PCP11498 1178 aaKnown RBP12.47□□□□□ -0.41
RFC1-203ENST00000418436 OSBPP22059 807 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 ASCC2Q9H1I8 757 aaPredicted RBP12.47□□□□□ -0.41
RFC1-203ENST00000418436 SH2D4AQ9H788 454 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 NYAP2Q9P242 653 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 CPA4Q9UI42 421 aa12.47□□□□□ -0.41
RFC1-203ENST00000418436 ZSWIM8A7E2V4 1837 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 ZNF213O14771 459 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 TSPY3P0CV98 308 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 TSPY8P0CW00 308 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 VCAM1P19320 739 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 HAND2P61296 217 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 CAP1Q01518 475 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 TFAP4Q01664 338 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
RFC1-203ENST00000418436 FAM47AQ5JRC9 791 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 AKNAD1Q5T1N1 836 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 CATSPERGQ6ZRH7 1159 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
RFC1-203ENST00000418436 TBC1D10CQ8IV04 446 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 STAG1Q8WVM7 1258 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 LPAR1Q92633 364 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 MKL1Q969V6 931 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 CEP95Q96GE4 821 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 ERO1AQ96HE7 468 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 P2RX7Q99572 595 aaKnown RBP12.46□□□□□ -0.41
RFC1-203ENST00000418436 VCPKMTQ9H867 229 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
RFC1-203ENST00000418436 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 GCLCP48506 637 aaPredicted RBP12.45□□□□□ -0.42
RFC1-203ENST00000418436 NOVP48745 357 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 FOSBP53539 338 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 LACTBP83111 547 aaPredicted RBP12.45□□□□□ -0.42
RFC1-203ENST00000418436 PTH1RQ03431 593 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 CD99L2Q8TCZ2 262 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 SMCR8Q8TEV9 937 aaPredicted RBP12.45□□□□□ -0.42
RFC1-203ENST00000418436 ESYT1Q9BSJ8 1104 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 RNF41Q9H4P4 317 aaPredicted RBP12.45□□□□□ -0.42
RFC1-203ENST00000418436 IL17RBQ9NRM6 502 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 SYNPO2Q9UMS6 1093 aa12.45□□□□□ -0.42
RFC1-203ENST00000418436 TSPY2A6NKD2 308 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 TTLL1O95922 423 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 NT5C2P49902 561 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 HERVK_113P62684 666 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
RFC1-203ENST00000418436 IMMTQ16891 758 aaKnown RBP12.44□□□□□ -0.42
RFC1-203ENST00000418436 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 MFSD6Q6ZSS7 791 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 TNS4Q8IZW8 715 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 NKX2-3Q8TAU0 364 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 MAP4K1Q92918 833 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 RPAP3Q9H6T3 665 aaPredicted RBP12.44□□□□□ -0.42
RFC1-203ENST00000418436 TCP11L1Q9NUJ3 509 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 MORF4L1Q9UBU8 362 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 CLIP2Q9UDT6 1046 aa12.44□□□□□ -0.42
RFC1-203ENST00000418436 A0A0G2JMZ2 1700 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 WDR46O15213 610 aaKnown RBP12.43□□□□□ -0.42
RFC1-203ENST00000418436 RANBP6O60518 1105 aaKnown RBP12.43□□□□□ -0.42
RFC1-203ENST00000418436 CTGFP29279 349 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
RFC1-203ENST00000418436 FAM110CQ1W6H9 321 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 OTOP1Q7RTM1 612 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 GTF3C2Q8WUA4 911 aaPredicted RBP12.43□□□□□ -0.42
RFC1-203ENST00000418436 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 GOPCQ9HD26 462 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 RBPJLQ9UBG7 517 aa12.43□□□□□ -0.42
RFC1-203ENST00000418436 NEDD4P46934 1319 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 F5H6K3 240 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 NMT2O60551 498 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 CDC45O75419 566 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 GNRH1P01148 92 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 KLRC3Q07444 240 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 COG2Q14746 738 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 KIF22Q14807 665 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms