RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 USP44Q9H0E7 712 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 RABEP2Q9H5N1 569 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 TPX2Q9ULW0 747 aaKnown RBP6.62□□□□□ -1.35
NPHP1-204ENST00000417665 LOC102724428A0A0B4J2F2 783 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 GNPATO15228 680 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 CYP27B1O15528 508 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 AHCYL1O43865 530 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 HSF2BPO75031 334 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 COQ9O75208 318 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 HMGB1P09429 215 aaKnown RBP6.62□□□□□ -1.35
NPHP1-204ENST00000417665 SYKP43405 635 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 RAB27AP51159 221 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 SIK1P57059 783 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 APBA1Q02410 837 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 PDCLQ13371 301 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 EMC10Q5UCC4 262 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 NCAPH2Q6IBW4 605 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 CAPRIN2Q6IMN6 1127 aaKnown RBP6.62□□□□□ -1.35
NPHP1-204ENST00000417665 FAM228AQ86W67 206 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 CNGA4Q8IV77 575 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 PARD3BQ8TEW8 1205 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 AENQ8WTP8 325 aaKnown RBP6.62□□□□□ -1.35
NPHP1-204ENST00000417665 OSBPL9Q96SU4 736 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 RNF181Q9P0P0 153 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 PCNTO95613 3336 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 MED23Q9ULK4 1368 aa6.62□□□□□ -1.35
NPHP1-204ENST00000417665 ERICH2A1L162 156 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 TULP1O00294 542 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 FESP07332 822 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 ZNF18P17022 549 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 IBSPP21815 317 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 FECHP22830 423 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 LSP1P33241 339 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 IFT88Q13099 833 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 ITPK1Q13572 414 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 NR1I3Q14994 352 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 C6orf89Q6UWU4 347 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 TMTC1Q8IUR5 882 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 ELOA2Q8IYF1 753 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 NLGN1Q8N2Q7 840 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 ENOX1Q8TC92 643 aaKnown RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 CCHCR1Q8TD31 782 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 RAPGEF4Q8WZA2 1011 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 FAM227BQ96M60 508 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SPAG5Q96R06 1193 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 CDC5LQ99459 802 aaKnown RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 CCDC87Q9NVE4 849 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 CORO1CQ9ULV4 474 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 EMILIN1Q9Y6C2 1016 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 A0A1B0GTH6 734 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 PSMD14O00487 310 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 MGRN1O60291 552 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 MFAP3LO75121 409 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 PPFIA3O75145 1194 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SKAP2O75563 359 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 PPP1R37O75864 691 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 FAM107AO95990 144 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 RPSAP08865 295 aaKnown RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 TATP17735 454 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 PEX19P40855 299 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 FOSBP53539 338 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 XRCC4Q13426 336 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 KCNB1Q14721 858 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 NKX1-1Q15270 411 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 E2F5Q15329 346 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 PTGISQ16647 500 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SPECC1Q5M775 1068 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 CRELD2Q6UXH1 353 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SYNE3Q6ZMZ3 975 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 MCM10Q7L590 875 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 NLRP14Q86W24 1093 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 MFN1Q8IWA4 741 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 USHBP1Q8N6Y0 703 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SPDYE1Q8NFV5 336 aaPredicted RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 TRIM58Q8NG06 486 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 RASSF8Q8NHQ8 419 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 ZBTB10Q96DT7 871 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 THOC1Q96FV9 657 aaKnown RBP6.61□□□□□ -1.35
NPHP1-204ENST00000417665 EBF2Q9HAK2 575 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 TSPYL4Q9UJ04 414 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 TRPC6Q9Y210 931 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SSUH2Q9Y2M2 353 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SAR1BQ9Y6B6 198 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 SALL1Q9NSC2 1324 aa6.61□□□□□ -1.35
NPHP1-204ENST00000417665 FAM237AA0A1B0GTK4 181 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 PPP1R12BO60237 982 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-204ENST00000417665 BUB1BO60566 1050 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-204ENST00000417665 SETSIPP0DME0 302 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 DSG3P32926 999 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 PSMD2Q13200 908 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 COL9A3Q14050 684 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-204ENST00000417665 PTPN21Q16825 1174 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 LACTB2Q53H82 288 aaPredicted RBP6.6□□□□□ -1.35
NPHP1-204ENST00000417665 MIS18BP1Q6P0N0 1132 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 EMBQ6PCB8 327 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 SND1Q7KZF4 910 aaKnown RBP eCLIP6.6□□□□□ -1.35
NPHP1-204ENST00000417665 BZW1Q7L1Q6 419 aaKnown RBP6.6□□□□□ -1.35
NPHP1-204ENST00000417665 MLKLQ8NB16 471 aa6.6□□□□□ -1.35
NPHP1-204ENST00000417665 MYCBPAPQ8TBZ2 947 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms