RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 GMCL1P1Q8NEA9 526 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 STK36Q9NRP7 1315 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
PTPN12-203ENST00000415482 PTPRAP18433 802 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 DGKZQ13574 1117 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 CCDC96Q2M329 555 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 TNPO1Q92973 898 aaKnown RBP11.37□□□□□ -0.59
PTPN12-203ENST00000415482 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 CHAMP1Q96JM3 812 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 ALG1Q9BT22 464 aa11.37□□□□□ -0.59
PTPN12-203ENST00000415482 RNF26Q9BY78 433 aaPredicted RBP11.37□□□□□ -0.59
PTPN12-203ENST00000415482 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
PTPN12-203ENST00000415482 ZSCAN22P10073 491 aaPredicted RBP11.36□□□□□ -0.59
PTPN12-203ENST00000415482 PDCP20941 246 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 SLC16A2P36021 539 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 VGLL4Q14135 290 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 ASPRV1Q53RT3 343 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 NOL9Q5SY16 702 aaKnown RBP11.36□□□□□ -0.59
PTPN12-203ENST00000415482 LDHDQ86WU2 507 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 DCAF4Q8WV16 495 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 GINM1Q9NU53 330 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 PPP1R12BO60237 982 aaPredicted RBP11.36□□□□□ -0.59
PTPN12-203ENST00000415482 DEXIO95424 95 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 SLC1A4P43007 532 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 GNAQP50148 359 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 VAT1LQ9HCJ6 419 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 PICK1Q9NRD5 415 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 SNCAIPQ9Y6H5 919 aa11.36□□□□□ -0.59
PTPN12-203ENST00000415482 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
PTPN12-203ENST00000415482 FERMT3Q86UX7 667 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 CNKSR2Q8WXI2 1034 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 CLMNQ96JQ2 1002 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 LZTS2Q9BRK4 669 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 SPZ1Q9BXG8 430 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 VCPKMTQ9H867 229 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 ISY1Q9ULR0 285 aaKnown RBP11.35□□□□□ -0.59
PTPN12-203ENST00000415482 SYNPO2Q9UMS6 1093 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 NF2P35240 595 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
PTPN12-203ENST00000415482 SPP2Q13103 211 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 TTLL12Q14166 644 aaPredicted RBP11.35□□□□□ -0.59
PTPN12-203ENST00000415482 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 FEZ1Q99689 392 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 RIOX1Q9H6W3 641 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 KIF3AQ9Y496 699 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 ZHX2Q9Y6X8 837 aa11.35□□□□□ -0.59
PTPN12-203ENST00000415482 H3BQV1 296 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 F13A1P00488 732 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 IREB2P48200 963 aaKnown RBP11.34□□□□□ -0.59
PTPN12-203ENST00000415482 MTMR2Q13614 643 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
PTPN12-203ENST00000415482 FAM83BQ5T0W9 1011 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 GPATCH4Q5T3I0 446 aaKnown RBP11.34□□□□□ -0.59
PTPN12-203ENST00000415482 IFFO2Q5TF58 517 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 KRT40Q6A162 431 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
PTPN12-203ENST00000415482 ADGRF4Q8IZF3 695 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 PIGSQ96S52 555 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 WDR18Q9BV38 432 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 ZNF408Q9H9D4 720 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 TRIM75PA6NK02 468 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 USP17L10C9JJH3 530 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 TMEM232C9JQI7 657 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 BMP3P12645 472 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 SMARCA1P28370 1054 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 MAP3K11Q16584 847 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
PTPN12-203ENST00000415482 ZNF280CQ8ND82 737 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 WASF1Q92558 559 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.596e-8■■■□□ 16.5
PTPN12-203ENST00000415482 SH2D4AQ9H788 454 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 VPS54Q9P1Q0 977 aa11.34□□□□□ -0.59
PTPN12-203ENST00000415482 SCG2P13521 617 aa11.33□□□□□ -0.6
PTPN12-203ENST00000415482 SNAP25P60880 206 aa11.33□□□□□ -0.6
PTPN12-203ENST00000415482 HOMER1Q86YM7 354 aa11.33□□□□□ -0.6
PTPN12-203ENST00000415482 ELP3Q9H9T3 547 aa11.33□□□□□ -0.6
PTPN12-203ENST00000415482 AFG3L2Q9Y4W6 797 aa11.33□□□□□ -0.6
PTPN12-203ENST00000415482 CSADQ9Y600 493 aa11.33□□□□□ -0.6
PTPN12-203ENST00000415482 KIF28PB7ZC32 967 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 ADAMTS3O15072 1205 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 BACE1P56817 501 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 RESTQ13127 1097 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 MCTP1Q6DN14 999 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 FAM173BQ6P4H8 233 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 TCHHQ07283 1943 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
PTPN12-203ENST00000415482 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
PTPN12-203ENST00000415482 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 BTNL9Q6UXG8 535 aa11.32□□□□□ -0.6
PTPN12-203ENST00000415482 ARMC9Q7Z3E5 817 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms