RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC01090-201ENST00000415357 ZMYM1Q5SVZ6 1142 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L2Q6R6M4 530 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 CHD1LQ86WJ1 897 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 AMOTL1Q8IY63 956 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 SH3TC2Q8TF17 1288 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 ARPP21Q9UBL0 812 aaPredicted RBP11.5□□□□□ -0.57
LINC01090-201ENST00000415357 SWAP70Q9UH65 585 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 MYPNQ86TC9 1320 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
LINC01090-201ENST00000415357 MGAMO43451 1857 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 MINDY4BA8MYZ0 360 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 TDO2P48775 406 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 FCGRTP55899 365 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 HERVK_113P62684 666 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 NUCB1Q02818 461 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 FAM110CQ1W6H9 321 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
LINC01090-201ENST00000415357 SLC9C1Q4G0N8 1177 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 ARMC5Q96C12 935 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 C12orf42Q96LP6 360 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 P2RX7Q99572 595 aaKnown RBP11.49□□□□□ -0.57
LINC01090-201ENST00000415357 KIAA1683Q9H0B3 1180 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 SRRDQ9UH36 339 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 SEPT9Q9UHD8 586 aaPredicted RBP11.49□□□□□ -0.57
LINC01090-201ENST00000415357 GABRQQ9UN88 632 aa11.49□□□□□ -0.57
LINC01090-201ENST00000415357 SMAPO00193 183 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 HRO43593 1189 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 APPP05067 770 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 VCAM1P19320 739 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
LINC01090-201ENST00000415357 RGS19P49795 217 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 ICA1Q05084 483 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 TMEM179Q6ZVK1 233 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 EVI5LQ96CN4 794 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
LINC01090-201ENST00000415357 ROBO3Q96MS0 1386 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 A0A0D9SFI3 127 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 TNPO2O14787 897 aaKnown RBP11.47□□□□□ -0.57
LINC01090-201ENST00000415357 FOXP2O15409 715 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 GNRH1P01148 92 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 GNAT2P19087 354 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 GCLCP48506 637 aaPredicted RBP11.47□□□□□ -0.57
LINC01090-201ENST00000415357 USP14P54578 494 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 MLLT1Q03111 559 aaPredicted RBP11.47□□□□□ -0.57
LINC01090-201ENST00000415357 KIAA1755Q5JYT7 1200 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 VPS53Q5VIR6 699 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 GIMAP6Q6P9H5 292 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 SIAH1Q8IUQ4 282 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 IFNL3Q8IZI9 196 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 RILPL2Q969X0 211 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 ZNF333Q96JL9 665 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 FAM227BQ96M60 508 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 PAGR1Q9BTK6 254 aa11.47□□□□□ -0.57
LINC01090-201ENST00000415357 RPAP3Q9H6T3 665 aaPredicted RBP11.47□□□□□ -0.57
LINC01090-201ENST00000415357 MKI67P46013 3256 aaKnown RBP11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L15C9J2P7 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L11C9JVI0 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L18D6R9N7 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L22D6RA61 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L19D6RCP7 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L20D6RJB6 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 C3orf80F5H4A9 247 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 PRDM1O75626 825 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 RASA1P20936 1047 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 HOXD10P28358 340 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 PRMT2P55345 433 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 ATP2B2Q01814 1243 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 USP17L24Q0WX57 530 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 CCDC17Q96LX7 622 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC01090-201ENST00000415357 NAPBQ9H115 298 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 RBPJLQ9UBG7 517 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 MORF4L1Q9UBU8 362 aa11.46□□□□□ -0.57
LINC01090-201ENST00000415357 GREB1LQ9C091 1923 aaPredicted RBP11.45□□□□□ -0.58
LINC01090-201ENST00000415357 BHMG1C9JSJ3 638 aaPredicted RBP11.45□□□□□ -0.58
LINC01090-201ENST00000415357 CNMDO75829 334 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 EEF2P13639 858 aaKnown RBP11.45□□□□□ -0.58
LINC01090-201ENST00000415357 ELNP15502 786 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 GRK4P32298 578 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 FLT3LGP49771 235 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 NMIQ13287 307 aaPredicted RBP11.45□□□□□ -0.58
LINC01090-201ENST00000415357 MTFR1Q15390 333 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 Q3C1V9 767 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 CATSPERGQ6ZRH7 1159 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 SPICE1Q8N0Z3 855 aa11.45□□□□□ -0.58
LINC01090-201ENST00000415357 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms