RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 HNRNPLLQ8WVV9 542 aaKnown RBP16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 LPIN2Q92539 896 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 CEP131Q9UPN4 1083 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 MST1RQ04912 1400 aa16.45■□□□□ 0.22
SEMA3F-202ENST00000413852 NDUFA10O95299 355 aa16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 PHF20Q9BVI0 1012 aa16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 GYG1P46976 350 aa16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 CYP26C1Q6V0L0 522 aa16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 HDAC7Q8WUI4 952 aa16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 CNNM2Q9H8M5 875 aa16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 TTF2Q9UNY4 1162 aaKnown RBP16.44■□□□□ 0.22
SEMA3F-202ENST00000413852 PAK1Q13153 545 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 SEC23AQ15436 765 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 CCDC122Q5T0U0 273 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 HPS3Q969F9 1004 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 PLA2G12BQ9BX93 195 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 FGFR2P21802 821 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 FUT2Q10981 343 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 ALX1Q15699 326 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 KRT26Q7Z3Y9 468 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 TMTC1Q8IUR5 882 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 NAA15Q9BXJ9 866 aaKnown RBP16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 CWC15Q9P013 229 aaKnown RBP16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 B4DLN1 442 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 EIF3CLB5ME19 914 aaKnown RBP16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 EIF3JO75822 258 aaKnown RBP16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 PLEKP08567 350 aaPredicted RBP16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 IL2RBP14784 551 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 GGCXP38435 758 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 TICAM2Q86XR7 235 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 EIF3CQ99613 913 aaKnown RBP16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 NACAP1Q9BZK3 213 aa16.43■□□□□ 0.22
SEMA3F-202ENST00000413852 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 CXCR5P32302 372 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 SLC7A5Q01650 507 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 IFIT1BQ5T764 474 aaKnown RBP16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 GSDMAQ96QA5 445 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 ATRNO75882 1429 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 TRIM28Q13263 835 aaKnown RBP16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 E2F4Q16254 413 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 LRRC15Q8TF66 581 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 RRP36Q96EU6 259 aaKnown RBP16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 PSD3Q9NYI0 1048 aa16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 GOLGB1Q14789 3259 aaKnown RBP16.42■□□□□ 0.22
SEMA3F-202ENST00000413852 CYP2D6P10635 497 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 SLC5A1P13866 664 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 ELOA2Q8IYF1 753 aaPredicted RBP16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 CTAGE1Q96RT6 745 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 WHAMMP3Q1A5X7 153 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 SUSD4Q5VX71 490 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 LIMA1Q9UHB6 759 aaKnown RBP16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 PDE8AO60658 829 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 ZPR1O75312 459 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 DNA2P51530 1060 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 EVA1CP58658 441 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 NLRP5P59047 1200 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 SMIM5Q71RC9 77 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 CCDC148Q8NFR7 591 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 HPCAL4Q9UM19 191 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 COL18A1P39060 1754 aa16.41■□□□□ 0.22
SEMA3F-202ENST00000413852 TRAPPC11Q7Z392 1133 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 KIAA1328Q86T90 577 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 FAM205AQ6ZU69 1335 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 WDR17Q8IZU2 1322 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 USP14P54578 494 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 ATP2B2Q01814 1243 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 ANKRD13CQ8N6S4 541 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 JADE2Q9NQC1 790 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 NOP2P46087 812 aaKnown RBP16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 SLC20A2Q08357 652 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 TNFRSF25Q93038 417 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 RNF26Q9BY78 433 aaPredicted RBP16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 CPVLQ9H3G5 476 aa16.4■□□□□ 0.22
SEMA3F-202ENST00000413852 STARD3NLO95772 234 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 IQUBQ8NA54 791 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 FAM71BQ8TC56 605 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 JAKMIP2Q96AA8 810 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 RASSF10A6NK89 507 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 MB21D1Q8N884 522 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 SAR1BQ9Y6B6 198 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 PLEKHG2Q9H7P9 1386 aa16.39■□□□□ 0.21
SEMA3F-202ENST00000413852 AGPSO00116 658 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 PDE4CQ08493 712 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms