RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 SLC9C1Q4G0N8 1177 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 MB21D1Q8N884 522 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 NKX2-3Q8TAU0 364 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 RAET1EQ8TD07 263 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 NUP88Q99567 741 aaPredicted RBP11.91□□□□□ -0.5
TMEM248-202ENST00000413593 FBXO28Q9NVF7 368 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
TMEM248-202ENST00000413593 MYH8P13535 1937 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 NT5C2P49902 561 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 IRF5Q13568 498 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 SLFN13Q68D06 897 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 SH3TC2Q8TF17 1288 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 ESR2Q92731 530 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 ZNF333Q96JL9 665 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 TCP11L1Q9NUJ3 509 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 PPP1R9AQ9ULJ8 1098 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 ADAMTS5Q9UNA0 930 aa11.9□□□□□ -0.5
TMEM248-202ENST00000413593 GRK4P32298 578 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 SOX10P56693 466 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 GPR142Q7Z601 462 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 PLEKHH3Q7Z736 793 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 NBPF11Q86T75 865 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 CCAR1Q8IX12 1150 aaKnown RBP11.89□□□□□ -0.51
TMEM248-202ENST00000413593 GMCL1Q96IK5 515 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 SLF1Q9BQI6 1058 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 MOV10L1Q9BXT6 1211 aaKnown RBP11.89□□□□□ -0.51
TMEM248-202ENST00000413593 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 HTTP42858 3142 aa11.89□□□□□ -0.51
TMEM248-202ENST00000413593 B4E1Z4 1266 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 VWA5AO00534 786 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 ADCY3O60266 1144 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 KDM4AO75164 1064 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 CYP21A2P08686 494 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 BMP3P12645 472 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 RCSD1Q6JBY9 416 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 SHCBP1Q8NEM2 672 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 TTC14Q96N46 770 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 KRT23Q9C075 422 aa11.88□□□□□ -0.51
TMEM248-202ENST00000413593 CDC45O75419 566 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 TOP1P11387 765 aaKnown RBP11.87□□□□□ -0.51
TMEM248-202ENST00000413593 ELNP15502 786 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 MCCP23508 829 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 SLC1A4P43007 532 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 PLS1Q14651 629 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 MORN1Q5T089 497 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 KIAA1211Q6ZU35 1233 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 RASGRP2Q7LDG7 609 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 PRPF38AQ8NAV1 312 aaKnown RBP11.87□□□□□ -0.51
TMEM248-202ENST00000413593 REPS2Q8NFH8 660 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 SOCS4Q8WXH5 440 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 USP6NLQ92738 828 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 ZKSCAN3Q9BRR0 538 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
TMEM248-202ENST00000413593 CNNM2Q9H8M5 875 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
TMEM248-202ENST00000413593 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
TMEM248-202ENST00000413593 ZNF214Q9UL59 606 aaPredicted RBP11.87□□□□□ -0.51
TMEM248-202ENST00000413593 A0A0G2JMZ2 1700 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 SLC15A5A6NIM6 579 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 TMEM232C9JQI7 657 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
TMEM248-202ENST00000413593 ERCC3P19447 782 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 CYP2B6P20813 491 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 PTPREP23469 700 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 CCDC178Q5BJE1 867 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 IQCA1Q86XH1 822 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 DGKHQ86XP1 1220 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 KIFC2Q96AC6 838 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 CHMP4CQ96CF2 233 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 ZSWIM5Q9P217 1185 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
TMEM248-202ENST00000413593 ISY1Q9ULR0 285 aaKnown RBP11.86□□□□□ -0.51
TMEM248-202ENST00000413593 RBM8AQ9Y5S9 174 aaKnown RBP11.86□□□□□ -0.51
TMEM248-202ENST00000413593 TAF6LQ9Y6J9 622 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 IVNS1ABPQ9Y6Y0 642 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 RLFQ13129 1914 aa11.86□□□□□ -0.51
TMEM248-202ENST00000413593 PLA2G6O60733 806 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 SLC25A27O95847 323 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 INHAP05111 366 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
TMEM248-202ENST00000413593 STAT3P40763 770 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 RGS2P41220 211 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 RGS19P49795 217 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 STAT2P52630 851 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 UBXN2AP68543 259 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 MAP2K5Q13163 448 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 GRB14Q14449 540 aa11.85□□□□□ -0.51
TMEM248-202ENST00000413593 MTFR1Q15390 333 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms